Gene : Lus10003510.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN Genomic Order:  8
Name:  ? Lus10003510.g Secondary Identifier:  ? PAC:23157272
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10003510.g 0.5kb upstream 0.5kb upstream 2376 true scaffold144: 27442-29817 Linum usitatissimum
Lus10003510.g 0.5kb upstream 0.5kb upstream 500 false scaffold144: 27442-27941 Linum usitatissimum
Lus10003510.g 0.5kb downstream 0.5kb downstream 2376 true scaffold144: 27942-30317 Linum usitatissimum
Lus10003510.g 0.5kb downstream 0.5kb downstream 500 false scaffold144: 29818-30317 Linum usitatissimum
Lus10003510.g 1.0kb upstream 1.0kb upstream 2876 true scaffold144: 26942-29817 Linum usitatissimum
Lus10003510.g 1.0kb upstream 1.0kb upstream 1000 false scaffold144: 26942-27941 Linum usitatissimum
Lus10003510.g 1.0kb downstream 1.0kb downstream 2876 true scaffold144: 27942-30817 Linum usitatissimum
Lus10003510.g 1.0kb downstream 1.0kb downstream 1000 false scaffold144: 29818-30817 Linum usitatissimum
Lus10003510.g 2.0kb upstream 2.0kb upstream 3876 true scaffold144: 25942-29817 Linum usitatissimum
Lus10003510.g 2.0kb upstream 2.0kb upstream 2000 false scaffold144: 25942-27941 Linum usitatissimum
Lus10003510.g 2.0kb downstream 2.0kb downstream 3876 true scaffold144: 27942-31817 Linum usitatissimum
Lus10003510.g 2.0kb downstream 2.0kb downstream 2000 false scaffold144: 29818-31817 Linum usitatissimum
Lus10003510.g 5.0kb upstream 5.0kb upstream 6876 true scaffold144: 22942-29817 Linum usitatissimum
Lus10003510.g 5.0kb upstream 5.0kb upstream 5000 false scaffold144: 22942-27941 Linum usitatissimum
Lus10003510.g 5.0kb downstream 5.0kb downstream 6876 true scaffold144: 27942-34817 Linum usitatissimum
Lus10003510.g 5.0kb downstream 5.0kb downstream 5000 false scaffold144: 29818-34817 Linum usitatissimum
Lus10003510.g 10.0kb upstream 10.0kb upstream 11876 true scaffold144: 17942-29817 Linum usitatissimum
Lus10003510.g 10.0kb upstream 10.0kb upstream 10000 false scaffold144: 17942-27941 Linum usitatissimum
Lus10003510.g 10.0kb downstream 10.0kb downstream 11876 true scaffold144: 27942-39817 Linum usitatissimum
Lus10003510.g 10.0kb downstream 10.0kb downstream 10000 false scaffold144: 29818-39817 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
122424289 5262 Malpighiales View MSA
124256009 5268 Malvidae View MSA
123953389 5270 Rosid View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain