Gene : Lus10025613.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR31423:SF3 - PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  128
Name:  ? Lus10025613.g Secondary Identifier:  ? PAC:23144962
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10025613.g 0.5kb upstream 0.5kb upstream 3257 true scaffold145: 651891-655147 Linum usitatissimum
Lus10025613.g 0.5kb upstream 0.5kb upstream 500 false scaffold145: 654648-655147 Linum usitatissimum
Lus10025613.g 0.5kb downstream 0.5kb downstream 3257 true scaffold145: 651391-654647 Linum usitatissimum
Lus10025613.g 0.5kb downstream 0.5kb downstream 500 false scaffold145: 651391-651890 Linum usitatissimum
Lus10025613.g 1.0kb upstream 1.0kb upstream 3757 true scaffold145: 651891-655647 Linum usitatissimum
Lus10025613.g 1.0kb upstream 1.0kb upstream 1000 false scaffold145: 654648-655647 Linum usitatissimum
Lus10025613.g 1.0kb downstream 1.0kb downstream 3757 true scaffold145: 650891-654647 Linum usitatissimum
Lus10025613.g 1.0kb downstream 1.0kb downstream 1000 false scaffold145: 650891-651890 Linum usitatissimum
Lus10025613.g 2.0kb upstream 2.0kb upstream 4757 true scaffold145: 651891-656647 Linum usitatissimum
Lus10025613.g 2.0kb upstream 2.0kb upstream 2000 false scaffold145: 654648-656647 Linum usitatissimum
Lus10025613.g 2.0kb downstream 2.0kb downstream 4757 true scaffold145: 649891-654647 Linum usitatissimum
Lus10025613.g 2.0kb downstream 2.0kb downstream 2000 false scaffold145: 649891-651890 Linum usitatissimum
Lus10025613.g 5.0kb upstream 5.0kb upstream 7757 true scaffold145: 651891-659647 Linum usitatissimum
Lus10025613.g 5.0kb upstream 5.0kb upstream 5000 false scaffold145: 654648-659647 Linum usitatissimum
Lus10025613.g 5.0kb downstream 5.0kb downstream 7757 true scaffold145: 646891-654647 Linum usitatissimum
Lus10025613.g 5.0kb downstream 5.0kb downstream 5000 false scaffold145: 646891-651890 Linum usitatissimum
Lus10025613.g 10.0kb upstream 10.0kb upstream 12757 true scaffold145: 651891-664647 Linum usitatissimum
Lus10025613.g 10.0kb upstream 10.0kb upstream 10000 false scaffold145: 654648-664647 Linum usitatissimum
Lus10025613.g 10.0kb downstream 10.0kb downstream 12757 true scaffold145: 641891-654647 Linum usitatissimum
Lus10025613.g 10.0kb downstream 10.0kb downstream 10000 false scaffold145: 641891-651890 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453510 5262 Malpighiales View MSA
124237844 5268 Malvidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain