Gene : Lus10039539.g L. usitatissimum v1.0
Defline:  (1 of 2) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Genomic Order:  49
Name:  ? Lus10039539.g Secondary Identifier:  ? PAC:23165040
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY0-162 Linum usitatissimum pathologic  
Lusitatissimum PWY-5686 Linum usitatissimum pathologic  
Lusitatissimum PWY-7211 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10039539.g 0.5kb upstream 0.5kb upstream 2987 true scaffold15: 348226-351212 Linum usitatissimum
Lus10039539.g 0.5kb upstream 0.5kb upstream 500 false scaffold15: 348226-348725 Linum usitatissimum
Lus10039539.g 0.5kb downstream 0.5kb downstream 2987 true scaffold15: 348726-351712 Linum usitatissimum
Lus10039539.g 0.5kb downstream 0.5kb downstream 500 false scaffold15: 351213-351712 Linum usitatissimum
Lus10039539.g 1.0kb upstream 1.0kb upstream 3487 true scaffold15: 347726-351212 Linum usitatissimum
Lus10039539.g 1.0kb upstream 1.0kb upstream 1000 false scaffold15: 347726-348725 Linum usitatissimum
Lus10039539.g 1.0kb downstream 1.0kb downstream 3487 true scaffold15: 348726-352212 Linum usitatissimum
Lus10039539.g 1.0kb downstream 1.0kb downstream 1000 false scaffold15: 351213-352212 Linum usitatissimum
Lus10039539.g 2.0kb upstream 2.0kb upstream 4487 true scaffold15: 346726-351212 Linum usitatissimum
Lus10039539.g 2.0kb upstream 2.0kb upstream 2000 false scaffold15: 346726-348725 Linum usitatissimum
Lus10039539.g 2.0kb downstream 2.0kb downstream 4487 true scaffold15: 348726-353212 Linum usitatissimum
Lus10039539.g 2.0kb downstream 2.0kb downstream 2000 false scaffold15: 351213-353212 Linum usitatissimum
Lus10039539.g 5.0kb upstream 5.0kb upstream 7487 true scaffold15: 343726-351212 Linum usitatissimum
Lus10039539.g 5.0kb upstream 5.0kb upstream 5000 false scaffold15: 343726-348725 Linum usitatissimum
Lus10039539.g 5.0kb downstream 5.0kb downstream 7487 true scaffold15: 348726-356212 Linum usitatissimum
Lus10039539.g 5.0kb downstream 5.0kb downstream 5000 false scaffold15: 351213-356212 Linum usitatissimum
Lus10039539.g 10.0kb upstream 10.0kb upstream 12487 true scaffold15: 338726-351212 Linum usitatissimum
Lus10039539.g 10.0kb upstream 10.0kb upstream 10000 false scaffold15: 338726-348725 Linum usitatissimum
Lus10039539.g 10.0kb downstream 10.0kb downstream 12487 true scaffold15: 348726-361212 Linum usitatissimum
Lus10039539.g 10.0kb downstream 10.0kb downstream 10000 false scaffold15: 351213-361212 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457991 5262 Malpighiales View MSA
124250162 5268 Malvidae View MSA
124060638 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain