Gene : Lus10040649.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11558//PTHR11558:SF28 - SPERMIDINE/SPERMINE SYNTHASE Genomic Order:  137
Name:  ? Lus10040649.g Secondary Identifier:  ? PAC:23157811
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum BSUBPOLYAMSYN-PWY Linum usitatissimum pathologic  
Lusitatissimum POLYAMINSYN3-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-7528 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10040649.g 0.5kb upstream 0.5kb upstream 2516 true scaffold156: 868583-871098 Linum usitatissimum
Lus10040649.g 0.5kb upstream 0.5kb upstream 500 false scaffold156: 868583-869082 Linum usitatissimum
Lus10040649.g 0.5kb downstream 0.5kb downstream 2516 true scaffold156: 869083-871598 Linum usitatissimum
Lus10040649.g 0.5kb downstream 0.5kb downstream 500 false scaffold156: 871099-871598 Linum usitatissimum
Lus10040649.g 1.0kb upstream 1.0kb upstream 3016 true scaffold156: 868083-871098 Linum usitatissimum
Lus10040649.g 1.0kb upstream 1.0kb upstream 1000 false scaffold156: 868083-869082 Linum usitatissimum
Lus10040649.g 1.0kb downstream 1.0kb downstream 3016 true scaffold156: 869083-872098 Linum usitatissimum
Lus10040649.g 1.0kb downstream 1.0kb downstream 1000 false scaffold156: 871099-872098 Linum usitatissimum
Lus10040649.g 2.0kb upstream 2.0kb upstream 4016 true scaffold156: 867083-871098 Linum usitatissimum
Lus10040649.g 2.0kb upstream 2.0kb upstream 2000 false scaffold156: 867083-869082 Linum usitatissimum
Lus10040649.g 2.0kb downstream 2.0kb downstream 4016 true scaffold156: 869083-873098 Linum usitatissimum
Lus10040649.g 2.0kb downstream 2.0kb downstream 2000 false scaffold156: 871099-873098 Linum usitatissimum
Lus10040649.g 5.0kb upstream 5.0kb upstream 7016 true scaffold156: 864083-871098 Linum usitatissimum
Lus10040649.g 5.0kb upstream 5.0kb upstream 5000 false scaffold156: 864083-869082 Linum usitatissimum
Lus10040649.g 5.0kb downstream 5.0kb downstream 7016 true scaffold156: 869083-876098 Linum usitatissimum
Lus10040649.g 5.0kb downstream 5.0kb downstream 5000 false scaffold156: 871099-876098 Linum usitatissimum
Lus10040649.g 10.0kb upstream 10.0kb upstream 12016 true scaffold156: 859083-871098 Linum usitatissimum
Lus10040649.g 10.0kb upstream 10.0kb upstream 10000 false scaffold156: 859083-869082 Linum usitatissimum
Lus10040649.g 10.0kb downstream 10.0kb downstream 12016 true scaffold156: 869083-881098 Linum usitatissimum
Lus10040649.g 10.0kb downstream 10.0kb downstream 10000 false scaffold156: 871099-881098 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427762 5262 Malpighiales View MSA
124246037 5268 Malvidae View MSA
124061949 5270 Rosid View MSA
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain