Gene : Lus10024378.g L. usitatissimum v1.0
Defline:  (1 of 4) PTHR11709:SF66 - LACCASE-17 Genomic Order:  112
Name:  ? Lus10024378.g Secondary Identifier:  ? PAC:23174883
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-5466 Linum usitatissimum pathologic  
Lusitatissimum PWY-6824 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10024378.g 0.5kb upstream 0.5kb upstream 3060 true scaffold16: 586298-589357 Linum usitatissimum
Lus10024378.g 0.5kb upstream 0.5kb upstream 500 false scaffold16: 588858-589357 Linum usitatissimum
Lus10024378.g 0.5kb downstream 0.5kb downstream 3060 true scaffold16: 585798-588857 Linum usitatissimum
Lus10024378.g 0.5kb downstream 0.5kb downstream 500 false scaffold16: 585798-586297 Linum usitatissimum
Lus10024378.g 1.0kb upstream 1.0kb upstream 3560 true scaffold16: 586298-589857 Linum usitatissimum
Lus10024378.g 1.0kb upstream 1.0kb upstream 1000 false scaffold16: 588858-589857 Linum usitatissimum
Lus10024378.g 1.0kb downstream 1.0kb downstream 3560 true scaffold16: 585298-588857 Linum usitatissimum
Lus10024378.g 1.0kb downstream 1.0kb downstream 1000 false scaffold16: 585298-586297 Linum usitatissimum
Lus10024378.g 2.0kb upstream 2.0kb upstream 4560 true scaffold16: 586298-590857 Linum usitatissimum
Lus10024378.g 2.0kb upstream 2.0kb upstream 2000 false scaffold16: 588858-590857 Linum usitatissimum
Lus10024378.g 2.0kb downstream 2.0kb downstream 4560 true scaffold16: 584298-588857 Linum usitatissimum
Lus10024378.g 2.0kb downstream 2.0kb downstream 2000 false scaffold16: 584298-586297 Linum usitatissimum
Lus10024378.g 5.0kb upstream 5.0kb upstream 7560 true scaffold16: 586298-593857 Linum usitatissimum
Lus10024378.g 5.0kb upstream 5.0kb upstream 5000 false scaffold16: 588858-593857 Linum usitatissimum
Lus10024378.g 5.0kb downstream 5.0kb downstream 7560 true scaffold16: 581298-588857 Linum usitatissimum
Lus10024378.g 5.0kb downstream 5.0kb downstream 5000 false scaffold16: 581298-586297 Linum usitatissimum
Lus10024378.g 10.0kb upstream 10.0kb upstream 12560 true scaffold16: 586298-598857 Linum usitatissimum
Lus10024378.g 10.0kb upstream 10.0kb upstream 10000 false scaffold16: 588858-598857 Linum usitatissimum
Lus10024378.g 10.0kb downstream 10.0kb downstream 12560 true scaffold16: 576298-588857 Linum usitatissimum
Lus10024378.g 10.0kb downstream 10.0kb downstream 10000 false scaffold16: 576298-586297 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458374 5262 Malpighiales View MSA
124253121 5268 Malvidae View MSA
124069683 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain