Gene : Lus10009994.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  30
Name:  ? Lus10009994.g Secondary Identifier:  ? PAC:23176676
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1081 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10009994.g 0.5kb upstream 0.5kb upstream 2575 true scaffold1630: 160476-163050 Linum usitatissimum
Lus10009994.g 0.5kb upstream 0.5kb upstream 500 false scaffold1630: 160476-160975 Linum usitatissimum
Lus10009994.g 0.5kb downstream 0.5kb downstream 2575 true scaffold1630: 160976-163550 Linum usitatissimum
Lus10009994.g 0.5kb downstream 0.5kb downstream 500 false scaffold1630: 163051-163550 Linum usitatissimum
Lus10009994.g 1.0kb upstream 1.0kb upstream 3075 true scaffold1630: 159976-163050 Linum usitatissimum
Lus10009994.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1630: 159976-160975 Linum usitatissimum
Lus10009994.g 1.0kb downstream 1.0kb downstream 3075 true scaffold1630: 160976-164050 Linum usitatissimum
Lus10009994.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1630: 163051-164050 Linum usitatissimum
Lus10009994.g 2.0kb upstream 2.0kb upstream 4075 true scaffold1630: 158976-163050 Linum usitatissimum
Lus10009994.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1630: 158976-160975 Linum usitatissimum
Lus10009994.g 2.0kb downstream 2.0kb downstream 4075 true scaffold1630: 160976-165050 Linum usitatissimum
Lus10009994.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1630: 163051-165050 Linum usitatissimum
Lus10009994.g 5.0kb upstream 5.0kb upstream 7075 true scaffold1630: 155976-163050 Linum usitatissimum
Lus10009994.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1630: 155976-160975 Linum usitatissimum
Lus10009994.g 5.0kb downstream 5.0kb downstream 7075 true scaffold1630: 160976-168050 Linum usitatissimum
Lus10009994.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1630: 163051-168050 Linum usitatissimum
Lus10009994.g 10.0kb upstream 10.0kb upstream 12075 true scaffold1630: 150976-163050 Linum usitatissimum
Lus10009994.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1630: 150976-160975 Linum usitatissimum
Lus10009994.g 10.0kb downstream 10.0kb downstream 12075 true scaffold1630: 160976-173050 Linum usitatissimum
Lus10009994.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1630: 163051-173050 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450307 5262 Malpighiales View MSA
124249445 5268 Malvidae View MSA
124066514 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain