Gene : Lus10023900.g L. usitatissimum v1.0
Defline:  (1 of 1) PF00120//PF04909 - Glutamine synthetase, catalytic domain (Gln-synt_C) // Amidohydrolase (Amidohydro_2) Genomic Order:  86
Name:  ? Lus10023900.g Secondary Identifier:  ? PAC:23160744
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLNSYN-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-3282 Linum usitatissimum pathologic  
Lusitatissimum PWY-381 Linum usitatissimum pathologic  
Lusitatissimum PWY-6549 Linum usitatissimum pathologic  
Lusitatissimum PWY-6963 Linum usitatissimum pathologic  
Lusitatissimum PWY-6964 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10023900.g 0.5kb upstream 0.5kb upstream 5421 true scaffold177: 442106-447526 Linum usitatissimum
Lus10023900.g 0.5kb upstream 0.5kb upstream 500 false scaffold177: 442106-442605 Linum usitatissimum
Lus10023900.g 0.5kb downstream 0.5kb downstream 5421 true scaffold177: 442606-448026 Linum usitatissimum
Lus10023900.g 0.5kb downstream 0.5kb downstream 500 false scaffold177: 447527-448026 Linum usitatissimum
Lus10023900.g 1.0kb upstream 1.0kb upstream 5921 true scaffold177: 441606-447526 Linum usitatissimum
Lus10023900.g 1.0kb upstream 1.0kb upstream 1000 false scaffold177: 441606-442605 Linum usitatissimum
Lus10023900.g 1.0kb downstream 1.0kb downstream 5921 true scaffold177: 442606-448526 Linum usitatissimum
Lus10023900.g 1.0kb downstream 1.0kb downstream 1000 false scaffold177: 447527-448526 Linum usitatissimum
Lus10023900.g 2.0kb upstream 2.0kb upstream 6921 true scaffold177: 440606-447526 Linum usitatissimum
Lus10023900.g 2.0kb upstream 2.0kb upstream 2000 false scaffold177: 440606-442605 Linum usitatissimum
Lus10023900.g 2.0kb downstream 2.0kb downstream 6921 true scaffold177: 442606-449526 Linum usitatissimum
Lus10023900.g 2.0kb downstream 2.0kb downstream 2000 false scaffold177: 447527-449526 Linum usitatissimum
Lus10023900.g 5.0kb upstream 5.0kb upstream 9921 true scaffold177: 437606-447526 Linum usitatissimum
Lus10023900.g 5.0kb upstream 5.0kb upstream 5000 false scaffold177: 437606-442605 Linum usitatissimum
Lus10023900.g 5.0kb downstream 5.0kb downstream 9921 true scaffold177: 442606-452526 Linum usitatissimum
Lus10023900.g 5.0kb downstream 5.0kb downstream 5000 false scaffold177: 447527-452526 Linum usitatissimum
Lus10023900.g 10.0kb upstream 10.0kb upstream 14921 true scaffold177: 432606-447526 Linum usitatissimum
Lus10023900.g 10.0kb upstream 10.0kb upstream 10000 false scaffold177: 432606-442605 Linum usitatissimum
Lus10023900.g 10.0kb downstream 10.0kb downstream 14921 true scaffold177: 442606-457526 Linum usitatissimum
Lus10023900.g 10.0kb downstream 10.0kb downstream 10000 false scaffold177: 447527-457526 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452124 5262 Malpighiales View MSA
124252817 5268 Malvidae View MSA
124062784 5270 Rosid View MSA
123749163 5271 Pentapetalae View MSA
122791802 5272 Eudicot View MSA
122046045 5273 Angiosperm View MSA
121348529 5274 Embryophyte View MSA
123428524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain