Gene : Lus10027707.g L. usitatissimum v1.0
Defline:  (1 of 4) PTHR11062:SF61 - XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE Genomic Order:  132
Name:  ? Lus10027707.g Secondary Identifier:  ? PAC:23151311
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-5980 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10027707.g 0.5kb upstream 0.5kb upstream 3805 true scaffold2: 1050930-1054734 Linum usitatissimum
Lus10027707.g 0.5kb upstream 0.5kb upstream 500 false scaffold2: 1054235-1054734 Linum usitatissimum
Lus10027707.g 0.5kb downstream 0.5kb downstream 3805 true scaffold2: 1050430-1054234 Linum usitatissimum
Lus10027707.g 0.5kb downstream 0.5kb downstream 500 false scaffold2: 1050430-1050929 Linum usitatissimum
Lus10027707.g 1.0kb upstream 1.0kb upstream 4305 true scaffold2: 1050930-1055234 Linum usitatissimum
Lus10027707.g 1.0kb upstream 1.0kb upstream 1000 false scaffold2: 1054235-1055234 Linum usitatissimum
Lus10027707.g 1.0kb downstream 1.0kb downstream 4305 true scaffold2: 1049930-1054234 Linum usitatissimum
Lus10027707.g 1.0kb downstream 1.0kb downstream 1000 false scaffold2: 1049930-1050929 Linum usitatissimum
Lus10027707.g 2.0kb upstream 2.0kb upstream 5305 true scaffold2: 1050930-1056234 Linum usitatissimum
Lus10027707.g 2.0kb upstream 2.0kb upstream 2000 false scaffold2: 1054235-1056234 Linum usitatissimum
Lus10027707.g 2.0kb downstream 2.0kb downstream 5305 true scaffold2: 1048930-1054234 Linum usitatissimum
Lus10027707.g 2.0kb downstream 2.0kb downstream 2000 false scaffold2: 1048930-1050929 Linum usitatissimum
Lus10027707.g 5.0kb upstream 5.0kb upstream 8305 true scaffold2: 1050930-1059234 Linum usitatissimum
Lus10027707.g 5.0kb upstream 5.0kb upstream 5000 false scaffold2: 1054235-1059234 Linum usitatissimum
Lus10027707.g 5.0kb downstream 5.0kb downstream 8305 true scaffold2: 1045930-1054234 Linum usitatissimum
Lus10027707.g 5.0kb downstream 5.0kb downstream 5000 false scaffold2: 1045930-1050929 Linum usitatissimum
Lus10027707.g 10.0kb upstream 10.0kb upstream 13305 true scaffold2: 1050930-1064234 Linum usitatissimum
Lus10027707.g 10.0kb upstream 10.0kb upstream 10000 false scaffold2: 1054235-1064234 Linum usitatissimum
Lus10027707.g 10.0kb downstream 10.0kb downstream 13305 true scaffold2: 1040930-1054234 Linum usitatissimum
Lus10027707.g 10.0kb downstream 10.0kb downstream 10000 false scaffold2: 1040930-1050929 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122413049 5262 Malpighiales View MSA
124252793 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain