Gene : Lus10001845.g L. usitatissimum v1.0
Defline:  (1 of 1) PTHR11699:SF49 - SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL Genomic Order:  12
Name:  ? Lus10001845.g Secondary Identifier:  ? PAC:23142388
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLUDEG-I-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-4321 Linum usitatissimum pathologic  
Lusitatissimum PWY-6473 Linum usitatissimum pathologic  
Lusitatissimum PWY-6535 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10001845.g 0.5kb upstream 0.5kb upstream 5944 true scaffold215: 67745-73688 Linum usitatissimum
Lus10001845.g 0.5kb upstream 0.5kb upstream 500 false scaffold215: 73189-73688 Linum usitatissimum
Lus10001845.g 0.5kb downstream 0.5kb downstream 5944 true scaffold215: 67245-73188 Linum usitatissimum
Lus10001845.g 0.5kb downstream 0.5kb downstream 500 false scaffold215: 67245-67744 Linum usitatissimum
Lus10001845.g 1.0kb upstream 1.0kb upstream 6444 true scaffold215: 67745-74188 Linum usitatissimum
Lus10001845.g 1.0kb upstream 1.0kb upstream 1000 false scaffold215: 73189-74188 Linum usitatissimum
Lus10001845.g 1.0kb downstream 1.0kb downstream 6444 true scaffold215: 66745-73188 Linum usitatissimum
Lus10001845.g 1.0kb downstream 1.0kb downstream 1000 false scaffold215: 66745-67744 Linum usitatissimum
Lus10001845.g 2.0kb upstream 2.0kb upstream 7444 true scaffold215: 67745-75188 Linum usitatissimum
Lus10001845.g 2.0kb upstream 2.0kb upstream 2000 false scaffold215: 73189-75188 Linum usitatissimum
Lus10001845.g 2.0kb downstream 2.0kb downstream 7444 true scaffold215: 65745-73188 Linum usitatissimum
Lus10001845.g 2.0kb downstream 2.0kb downstream 2000 false scaffold215: 65745-67744 Linum usitatissimum
Lus10001845.g 5.0kb upstream 5.0kb upstream 10444 true scaffold215: 67745-78188 Linum usitatissimum
Lus10001845.g 5.0kb upstream 5.0kb upstream 5000 false scaffold215: 73189-78188 Linum usitatissimum
Lus10001845.g 5.0kb downstream 5.0kb downstream 10444 true scaffold215: 62745-73188 Linum usitatissimum
Lus10001845.g 5.0kb downstream 5.0kb downstream 5000 false scaffold215: 62745-67744 Linum usitatissimum
Lus10001845.g 10.0kb upstream 10.0kb upstream 15444 true scaffold215: 67745-83188 Linum usitatissimum
Lus10001845.g 10.0kb upstream 10.0kb upstream 10000 false scaffold215: 73189-83188 Linum usitatissimum
Lus10001845.g 10.0kb downstream 10.0kb downstream 15444 true scaffold215: 57745-73188 Linum usitatissimum
Lus10001845.g 10.0kb downstream 10.0kb downstream 10000 false scaffold215: 57745-67744 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457320 5262 Malpighiales View MSA
124242671 5268 Malvidae View MSA
124063190 5270 Rosid View MSA
123737868 5271 Pentapetalae View MSA
122769906 5272 Eudicot View MSA
122045886 5273 Angiosperm View MSA
121345720 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain