Gene : Lus10019942.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11680:SF7 - SERINE HYDROXYMETHYLTRANSFERASE 6-RELATED Genomic Order:  2
Name:  ? Lus10019942.g Secondary Identifier:  ? PAC:23156209
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLYSYN-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-2161 Linum usitatissimum pathologic  
Lusitatissimum PWY-3841 Linum usitatissimum pathologic  
Lusitatissimum SER-GLYSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10019942.g 0.5kb upstream 0.5kb upstream 3179 true scaffold23: 4639-7817 Linum usitatissimum
Lus10019942.g 0.5kb upstream 0.5kb upstream 500 false scaffold23: 4639-5138 Linum usitatissimum
Lus10019942.g 0.5kb downstream 0.5kb downstream 3179 true scaffold23: 5139-8317 Linum usitatissimum
Lus10019942.g 0.5kb downstream 0.5kb downstream 500 false scaffold23: 7818-8317 Linum usitatissimum
Lus10019942.g 1.0kb upstream 1.0kb upstream 3679 true scaffold23: 4139-7817 Linum usitatissimum
Lus10019942.g 1.0kb upstream 1.0kb upstream 1000 false scaffold23: 4139-5138 Linum usitatissimum
Lus10019942.g 1.0kb downstream 1.0kb downstream 3679 true scaffold23: 5139-8817 Linum usitatissimum
Lus10019942.g 1.0kb downstream 1.0kb downstream 1000 false scaffold23: 7818-8817 Linum usitatissimum
Lus10019942.g 2.0kb upstream 2.0kb upstream 4679 true scaffold23: 3139-7817 Linum usitatissimum
Lus10019942.g 2.0kb upstream 2.0kb upstream 2000 false scaffold23: 3139-5138 Linum usitatissimum
Lus10019942.g 2.0kb downstream 2.0kb downstream 4679 true scaffold23: 5139-9817 Linum usitatissimum
Lus10019942.g 2.0kb downstream 2.0kb downstream 2000 false scaffold23: 7818-9817 Linum usitatissimum
Lus10019942.g 5.0kb upstream 5.0kb upstream 7679 true scaffold23: 139-7817 Linum usitatissimum
Lus10019942.g 5.0kb upstream 5.0kb upstream 5000 false scaffold23: 139-5138 Linum usitatissimum
Lus10019942.g 5.0kb downstream 5.0kb downstream 7679 true scaffold23: 5139-12817 Linum usitatissimum
Lus10019942.g 5.0kb downstream 5.0kb downstream 5000 false scaffold23: 7818-12817 Linum usitatissimum
Lus10019942.g 10.0kb upstream 10.0kb upstream 7817 true scaffold23: 1-7817 Linum usitatissimum
Lus10019942.g 10.0kb upstream 10.0kb upstream 5138 false scaffold23: 1-5138 Linum usitatissimum
Lus10019942.g 10.0kb downstream 10.0kb downstream 12679 true scaffold23: 5139-17817 Linum usitatissimum
Lus10019942.g 10.0kb downstream 10.0kb downstream 10000 false scaffold23: 7818-17817 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453590 5262 Malpighiales View MSA
124253011 5268 Malvidae View MSA
124069560 5270 Rosid View MSA
123741866 5271 Pentapetalae View MSA
122787051 5272 Eudicot View MSA
122046261 5273 Angiosperm View MSA
121345900 5274 Embryophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain