Gene : Lus10043129.g L. usitatissimum v1.0
Defline:  (1 of 7) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  195
Name:  ? Lus10043129.g Secondary Identifier:  ? PAC:23168100
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum BRANCHED-CHAIN-AA-SYN-PWY Linum usitatissimum pathologic  
Lusitatissimum LEUSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10043129.g 0.5kb upstream 0.5kb upstream 4040 true scaffold25: 1333711-1337750 Linum usitatissimum
Lus10043129.g 0.5kb upstream 0.5kb upstream 500 false scaffold25: 1337251-1337750 Linum usitatissimum
Lus10043129.g 0.5kb downstream 0.5kb downstream 4040 true scaffold25: 1333211-1337250 Linum usitatissimum
Lus10043129.g 0.5kb downstream 0.5kb downstream 500 false scaffold25: 1333211-1333710 Linum usitatissimum
Lus10043129.g 1.0kb upstream 1.0kb upstream 4540 true scaffold25: 1333711-1338250 Linum usitatissimum
Lus10043129.g 1.0kb upstream 1.0kb upstream 1000 false scaffold25: 1337251-1338250 Linum usitatissimum
Lus10043129.g 1.0kb downstream 1.0kb downstream 4540 true scaffold25: 1332711-1337250 Linum usitatissimum
Lus10043129.g 1.0kb downstream 1.0kb downstream 1000 false scaffold25: 1332711-1333710 Linum usitatissimum
Lus10043129.g 2.0kb upstream 2.0kb upstream 5540 true scaffold25: 1333711-1339250 Linum usitatissimum
Lus10043129.g 2.0kb upstream 2.0kb upstream 2000 false scaffold25: 1337251-1339250 Linum usitatissimum
Lus10043129.g 2.0kb downstream 2.0kb downstream 5540 true scaffold25: 1331711-1337250 Linum usitatissimum
Lus10043129.g 2.0kb downstream 2.0kb downstream 2000 false scaffold25: 1331711-1333710 Linum usitatissimum
Lus10043129.g 5.0kb upstream 5.0kb upstream 8540 true scaffold25: 1333711-1342250 Linum usitatissimum
Lus10043129.g 5.0kb upstream 5.0kb upstream 5000 false scaffold25: 1337251-1342250 Linum usitatissimum
Lus10043129.g 5.0kb downstream 5.0kb downstream 8540 true scaffold25: 1328711-1337250 Linum usitatissimum
Lus10043129.g 5.0kb downstream 5.0kb downstream 5000 false scaffold25: 1328711-1333710 Linum usitatissimum
Lus10043129.g 10.0kb upstream 10.0kb upstream 13540 true scaffold25: 1333711-1347250 Linum usitatissimum
Lus10043129.g 10.0kb upstream 10.0kb upstream 10000 false scaffold25: 1337251-1347250 Linum usitatissimum
Lus10043129.g 10.0kb downstream 10.0kb downstream 13540 true scaffold25: 1323711-1337250 Linum usitatissimum
Lus10043129.g 10.0kb downstream 10.0kb downstream 10000 false scaffold25: 1323711-1333710 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461531 5262 Malpighiales View MSA
124238803 5268 Malvidae View MSA
124064281 5270 Rosid View MSA
123737905 5271 Pentapetalae View MSA
122792861 5272 Eudicot View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain