Gene : Lus10043158.g L. usitatissimum v1.0

Defline:  (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  224
Name:  ? Lus10043158.g Secondary Identifier:  ? PAC:23168049

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10043158.g 0.5kb upstream 0.5kb upstream 1673 true scaffold25: 1494401-1496073 Linum usitatissimum
Lus10043158.g 0.5kb upstream 0.5kb upstream 500 false scaffold25: 1495574-1496073 Linum usitatissimum
Lus10043158.g 0.5kb downstream 0.5kb downstream 1673 true scaffold25: 1493901-1495573 Linum usitatissimum
Lus10043158.g 0.5kb downstream 0.5kb downstream 500 false scaffold25: 1493901-1494400 Linum usitatissimum
Lus10043158.g 1.0kb upstream 1.0kb upstream 2173 true scaffold25: 1494401-1496573 Linum usitatissimum
Lus10043158.g 1.0kb upstream 1.0kb upstream 1000 false scaffold25: 1495574-1496573 Linum usitatissimum
Lus10043158.g 1.0kb downstream 1.0kb downstream 2173 true scaffold25: 1493401-1495573 Linum usitatissimum
Lus10043158.g 1.0kb downstream 1.0kb downstream 1000 false scaffold25: 1493401-1494400 Linum usitatissimum
Lus10043158.g 2.0kb upstream 2.0kb upstream 3173 true scaffold25: 1494401-1497573 Linum usitatissimum
Lus10043158.g 2.0kb upstream 2.0kb upstream 2000 false scaffold25: 1495574-1497573 Linum usitatissimum
Lus10043158.g 2.0kb downstream 2.0kb downstream 3173 true scaffold25: 1492401-1495573 Linum usitatissimum
Lus10043158.g 2.0kb downstream 2.0kb downstream 2000 false scaffold25: 1492401-1494400 Linum usitatissimum
Lus10043158.g 5.0kb upstream 5.0kb upstream 6173 true scaffold25: 1494401-1500573 Linum usitatissimum
Lus10043158.g 5.0kb upstream 5.0kb upstream 5000 false scaffold25: 1495574-1500573 Linum usitatissimum
Lus10043158.g 5.0kb downstream 5.0kb downstream 6173 true scaffold25: 1489401-1495573 Linum usitatissimum
Lus10043158.g 5.0kb downstream 5.0kb downstream 5000 false scaffold25: 1489401-1494400 Linum usitatissimum
Lus10043158.g 10.0kb upstream 10.0kb upstream 11173 true scaffold25: 1494401-1505573 Linum usitatissimum
Lus10043158.g 10.0kb upstream 10.0kb upstream 10000 false scaffold25: 1495574-1505573 Linum usitatissimum
Lus10043158.g 10.0kb downstream 10.0kb downstream 11173 true scaffold25: 1484401-1495573 Linum usitatissimum
Lus10043158.g 10.0kb downstream 10.0kb downstream 10000 false scaffold25: 1484401-1494400 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454765 5262 Malpighiales View MSA
124249680 5268 Malvidae View MSA
124061793 5270 Rosid View MSA
123747878 5271 Pentapetalae View MSA
122791665 5272 Eudicot View MSA
122044174 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348177 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain