Gene : Lus10043145.g L. usitatissimum v1.0
Defline:  (1 of 3) PTHR31332:SF0 - 7-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTIC Genomic Order:  211
Name:  ? Lus10043145.g Secondary Identifier:  ? PAC:23168190
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-5068 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10043145.g 0.5kb upstream 0.5kb upstream 3442 true scaffold25: 1418640-1422081 Linum usitatissimum
Lus10043145.g 0.5kb upstream 0.5kb upstream 500 false scaffold25: 1421582-1422081 Linum usitatissimum
Lus10043145.g 0.5kb downstream 0.5kb downstream 3442 true scaffold25: 1418140-1421581 Linum usitatissimum
Lus10043145.g 0.5kb downstream 0.5kb downstream 500 false scaffold25: 1418140-1418639 Linum usitatissimum
Lus10043145.g 1.0kb upstream 1.0kb upstream 3942 true scaffold25: 1418640-1422581 Linum usitatissimum
Lus10043145.g 1.0kb upstream 1.0kb upstream 1000 false scaffold25: 1421582-1422581 Linum usitatissimum
Lus10043145.g 1.0kb downstream 1.0kb downstream 3942 true scaffold25: 1417640-1421581 Linum usitatissimum
Lus10043145.g 1.0kb downstream 1.0kb downstream 1000 false scaffold25: 1417640-1418639 Linum usitatissimum
Lus10043145.g 2.0kb upstream 2.0kb upstream 4942 true scaffold25: 1418640-1423581 Linum usitatissimum
Lus10043145.g 2.0kb upstream 2.0kb upstream 2000 false scaffold25: 1421582-1423581 Linum usitatissimum
Lus10043145.g 2.0kb downstream 2.0kb downstream 4942 true scaffold25: 1416640-1421581 Linum usitatissimum
Lus10043145.g 2.0kb downstream 2.0kb downstream 2000 false scaffold25: 1416640-1418639 Linum usitatissimum
Lus10043145.g 5.0kb upstream 5.0kb upstream 7942 true scaffold25: 1418640-1426581 Linum usitatissimum
Lus10043145.g 5.0kb upstream 5.0kb upstream 5000 false scaffold25: 1421582-1426581 Linum usitatissimum
Lus10043145.g 5.0kb downstream 5.0kb downstream 7942 true scaffold25: 1413640-1421581 Linum usitatissimum
Lus10043145.g 5.0kb downstream 5.0kb downstream 5000 false scaffold25: 1413640-1418639 Linum usitatissimum
Lus10043145.g 10.0kb upstream 10.0kb upstream 12942 true scaffold25: 1418640-1431581 Linum usitatissimum
Lus10043145.g 10.0kb upstream 10.0kb upstream 10000 false scaffold25: 1421582-1431581 Linum usitatissimum
Lus10043145.g 10.0kb downstream 10.0kb downstream 12942 true scaffold25: 1408640-1421581 Linum usitatissimum
Lus10043145.g 10.0kb downstream 10.0kb downstream 10000 false scaffold25: 1408640-1418639 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451139 5262 Malpighiales View MSA
124240416 5268 Malvidae View MSA
124061681 5270 Rosid View MSA
123745545 5271 Pentapetalae View MSA
122786931 5272 Eudicot View MSA
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain