Gene : Lus10006934.g L. usitatissimum v1.0
Defline:  (1 of 1) PF00289//PF00364//PF01039//PF02785//PF08326//PF13535 - Carbamoyl-phosphate synthase L chain, N-terminal domain (CPSase_L_chain) // Biotin-requiring enzyme (Biotin_lipoyl) // Carboxyl transferase domain (Carboxyl_trans) // Biotin carboxylase C-terminal domain (Biotin_carb_C) // Acetyl-CoA carboxylase, central region (ACC_central) // ATP-grasp domain (ATP-grasp_4) Genomic Order:  3
Name:  ? Lus10006934.g Secondary Identifier:  ? PAC:23158095
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY0-1264 Linum usitatissimum pathologic  
Lusitatissimum PWY-4381 Linum usitatissimum pathologic  
Lusitatissimum PWY-5156 Linum usitatissimum pathologic  
Lusitatissimum PWY-7388 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10006934.g 0.5kb upstream 0.5kb upstream 11539 true scaffold253: 47123-58661 Linum usitatissimum
Lus10006934.g 0.5kb upstream 0.5kb upstream 500 false scaffold253: 47123-47622 Linum usitatissimum
Lus10006934.g 0.5kb downstream 0.5kb downstream 11539 true scaffold253: 47623-59161 Linum usitatissimum
Lus10006934.g 0.5kb downstream 0.5kb downstream 500 false scaffold253: 58662-59161 Linum usitatissimum
Lus10006934.g 1.0kb upstream 1.0kb upstream 12039 true scaffold253: 46623-58661 Linum usitatissimum
Lus10006934.g 1.0kb upstream 1.0kb upstream 1000 false scaffold253: 46623-47622 Linum usitatissimum
Lus10006934.g 1.0kb downstream 1.0kb downstream 12039 true scaffold253: 47623-59661 Linum usitatissimum
Lus10006934.g 1.0kb downstream 1.0kb downstream 1000 false scaffold253: 58662-59661 Linum usitatissimum
Lus10006934.g 2.0kb upstream 2.0kb upstream 13039 true scaffold253: 45623-58661 Linum usitatissimum
Lus10006934.g 2.0kb upstream 2.0kb upstream 2000 false scaffold253: 45623-47622 Linum usitatissimum
Lus10006934.g 2.0kb downstream 2.0kb downstream 13039 true scaffold253: 47623-60661 Linum usitatissimum
Lus10006934.g 2.0kb downstream 2.0kb downstream 2000 false scaffold253: 58662-60661 Linum usitatissimum
Lus10006934.g 5.0kb upstream 5.0kb upstream 16039 true scaffold253: 42623-58661 Linum usitatissimum
Lus10006934.g 5.0kb upstream 5.0kb upstream 5000 false scaffold253: 42623-47622 Linum usitatissimum
Lus10006934.g 5.0kb downstream 5.0kb downstream 16039 true scaffold253: 47623-63661 Linum usitatissimum
Lus10006934.g 5.0kb downstream 5.0kb downstream 5000 false scaffold253: 58662-63661 Linum usitatissimum
Lus10006934.g 10.0kb upstream 10.0kb upstream 21039 true scaffold253: 37623-58661 Linum usitatissimum
Lus10006934.g 10.0kb upstream 10.0kb upstream 10000 false scaffold253: 37623-47622 Linum usitatissimum
Lus10006934.g 10.0kb downstream 10.0kb downstream 21039 true scaffold253: 47623-68661 Linum usitatissimum
Lus10006934.g 10.0kb downstream 10.0kb downstream 10000 false scaffold253: 58662-68661 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041353 5273 Angiosperm View MSA
122459168 5262 Malpighiales View MSA
124249572 5268 Malvidae View MSA
124064007 5270 Rosid View MSA
123738277 5271 Pentapetalae View MSA
122788155 5272 Eudicot View MSA
121349093 5274 Embryophyte View MSA
123428824 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain