Gene : Lus10012222.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11954:SF25 - LS1-LIKE PROTEIN Genomic Order:  12
Name:  ? Lus10012222.g Secondary Identifier:  ? PAC:23172700
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-6498 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10012222.g 0.5kb upstream 0.5kb upstream 2878 true scaffold273: 63399-66276 Linum usitatissimum
Lus10012222.g 0.5kb upstream 0.5kb upstream 500 false scaffold273: 63399-63898 Linum usitatissimum
Lus10012222.g 0.5kb downstream 0.5kb downstream 2878 true scaffold273: 63899-66776 Linum usitatissimum
Lus10012222.g 0.5kb downstream 0.5kb downstream 500 false scaffold273: 66277-66776 Linum usitatissimum
Lus10012222.g 1.0kb upstream 1.0kb upstream 3378 true scaffold273: 62899-66276 Linum usitatissimum
Lus10012222.g 1.0kb upstream 1.0kb upstream 1000 false scaffold273: 62899-63898 Linum usitatissimum
Lus10012222.g 1.0kb downstream 1.0kb downstream 3378 true scaffold273: 63899-67276 Linum usitatissimum
Lus10012222.g 1.0kb downstream 1.0kb downstream 1000 false scaffold273: 66277-67276 Linum usitatissimum
Lus10012222.g 2.0kb upstream 2.0kb upstream 4378 true scaffold273: 61899-66276 Linum usitatissimum
Lus10012222.g 2.0kb upstream 2.0kb upstream 2000 false scaffold273: 61899-63898 Linum usitatissimum
Lus10012222.g 2.0kb downstream 2.0kb downstream 4378 true scaffold273: 63899-68276 Linum usitatissimum
Lus10012222.g 2.0kb downstream 2.0kb downstream 2000 false scaffold273: 66277-68276 Linum usitatissimum
Lus10012222.g 5.0kb upstream 5.0kb upstream 7378 true scaffold273: 58899-66276 Linum usitatissimum
Lus10012222.g 5.0kb upstream 5.0kb upstream 5000 false scaffold273: 58899-63898 Linum usitatissimum
Lus10012222.g 5.0kb downstream 5.0kb downstream 7378 true scaffold273: 63899-71276 Linum usitatissimum
Lus10012222.g 5.0kb downstream 5.0kb downstream 5000 false scaffold273: 66277-71276 Linum usitatissimum
Lus10012222.g 10.0kb upstream 10.0kb upstream 12378 true scaffold273: 53899-66276 Linum usitatissimum
Lus10012222.g 10.0kb upstream 10.0kb upstream 10000 false scaffold273: 53899-63898 Linum usitatissimum
Lus10012222.g 10.0kb downstream 10.0kb downstream 12378 true scaffold273: 63899-76276 Linum usitatissimum
Lus10012222.g 10.0kb downstream 10.0kb downstream 10000 false scaffold273: 66277-76276 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026284 5273 Angiosperm View MSA
122455293 5262 Malpighiales View MSA
124250805 5268 Malvidae View MSA
124069445 5270 Rosid View MSA
123741534 5271 Pentapetalae View MSA
122794012 5272 Eudicot View MSA
121349175 5274 Embryophyte View MSA
123424544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain