Gene : Lus10038505.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  365
Name:  ? Lus10038505.g Secondary Identifier:  ? PAC:23158197
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-5173 Linum usitatissimum pathologic  
Lusitatissimum PWY-5464 Linum usitatissimum pathologic  
Lusitatissimum PYRUVDEHYD-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10038505.g 0.5kb upstream 0.5kb upstream 2550 true scaffold28: 1676740-1679289 Linum usitatissimum
Lus10038505.g 0.5kb upstream 0.5kb upstream 500 false scaffold28: 1678790-1679289 Linum usitatissimum
Lus10038505.g 0.5kb downstream 0.5kb downstream 2550 true scaffold28: 1676240-1678789 Linum usitatissimum
Lus10038505.g 0.5kb downstream 0.5kb downstream 500 false scaffold28: 1676240-1676739 Linum usitatissimum
Lus10038505.g 1.0kb upstream 1.0kb upstream 3050 true scaffold28: 1676740-1679789 Linum usitatissimum
Lus10038505.g 1.0kb upstream 1.0kb upstream 1000 false scaffold28: 1678790-1679789 Linum usitatissimum
Lus10038505.g 1.0kb downstream 1.0kb downstream 3050 true scaffold28: 1675740-1678789 Linum usitatissimum
Lus10038505.g 1.0kb downstream 1.0kb downstream 1000 false scaffold28: 1675740-1676739 Linum usitatissimum
Lus10038505.g 2.0kb upstream 2.0kb upstream 4050 true scaffold28: 1676740-1680789 Linum usitatissimum
Lus10038505.g 2.0kb upstream 2.0kb upstream 2000 false scaffold28: 1678790-1680789 Linum usitatissimum
Lus10038505.g 2.0kb downstream 2.0kb downstream 4050 true scaffold28: 1674740-1678789 Linum usitatissimum
Lus10038505.g 2.0kb downstream 2.0kb downstream 2000 false scaffold28: 1674740-1676739 Linum usitatissimum
Lus10038505.g 5.0kb upstream 5.0kb upstream 7050 true scaffold28: 1676740-1683789 Linum usitatissimum
Lus10038505.g 5.0kb upstream 5.0kb upstream 5000 false scaffold28: 1678790-1683789 Linum usitatissimum
Lus10038505.g 5.0kb downstream 5.0kb downstream 7050 true scaffold28: 1671740-1678789 Linum usitatissimum
Lus10038505.g 5.0kb downstream 5.0kb downstream 5000 false scaffold28: 1671740-1676739 Linum usitatissimum
Lus10038505.g 10.0kb upstream 10.0kb upstream 12050 true scaffold28: 1676740-1688789 Linum usitatissimum
Lus10038505.g 10.0kb upstream 10.0kb upstream 10000 false scaffold28: 1678790-1688789 Linum usitatissimum
Lus10038505.g 10.0kb downstream 10.0kb downstream 12050 true scaffold28: 1666740-1678789 Linum usitatissimum
Lus10038505.g 10.0kb downstream 10.0kb downstream 10000 false scaffold28: 1666740-1676739 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464907 5262 Malpighiales View MSA
124241225 5268 Malvidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain