Gene : Lus10040908.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR21089//PTHR21089:SF7 - SHIKIMATE DEHYDROGENASE Genomic Order:  12
Name:  ? Lus10040908.g Secondary Identifier:  ? PAC:23179553
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum ARO-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-6163 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10040908.g 0.5kb upstream 0.5kb upstream 4190 true scaffold280: 63993-68182 Linum usitatissimum
Lus10040908.g 0.5kb upstream 0.5kb upstream 500 false scaffold280: 63993-64492 Linum usitatissimum
Lus10040908.g 0.5kb downstream 0.5kb downstream 4190 true scaffold280: 64493-68682 Linum usitatissimum
Lus10040908.g 0.5kb downstream 0.5kb downstream 500 false scaffold280: 68183-68682 Linum usitatissimum
Lus10040908.g 1.0kb upstream 1.0kb upstream 4690 true scaffold280: 63493-68182 Linum usitatissimum
Lus10040908.g 1.0kb upstream 1.0kb upstream 1000 false scaffold280: 63493-64492 Linum usitatissimum
Lus10040908.g 1.0kb downstream 1.0kb downstream 4690 true scaffold280: 64493-69182 Linum usitatissimum
Lus10040908.g 1.0kb downstream 1.0kb downstream 1000 false scaffold280: 68183-69182 Linum usitatissimum
Lus10040908.g 2.0kb upstream 2.0kb upstream 5690 true scaffold280: 62493-68182 Linum usitatissimum
Lus10040908.g 2.0kb upstream 2.0kb upstream 2000 false scaffold280: 62493-64492 Linum usitatissimum
Lus10040908.g 2.0kb downstream 2.0kb downstream 5690 true scaffold280: 64493-70182 Linum usitatissimum
Lus10040908.g 2.0kb downstream 2.0kb downstream 2000 false scaffold280: 68183-70182 Linum usitatissimum
Lus10040908.g 5.0kb upstream 5.0kb upstream 8690 true scaffold280: 59493-68182 Linum usitatissimum
Lus10040908.g 5.0kb upstream 5.0kb upstream 5000 false scaffold280: 59493-64492 Linum usitatissimum
Lus10040908.g 5.0kb downstream 5.0kb downstream 8690 true scaffold280: 64493-73182 Linum usitatissimum
Lus10040908.g 5.0kb downstream 5.0kb downstream 5000 false scaffold280: 68183-73182 Linum usitatissimum
Lus10040908.g 10.0kb upstream 10.0kb upstream 13690 true scaffold280: 54493-68182 Linum usitatissimum
Lus10040908.g 10.0kb upstream 10.0kb upstream 10000 false scaffold280: 54493-64492 Linum usitatissimum
Lus10040908.g 10.0kb downstream 10.0kb downstream 13690 true scaffold280: 64493-78182 Linum usitatissimum
Lus10040908.g 10.0kb downstream 10.0kb downstream 10000 false scaffold280: 68183-78182 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791917 5273 Angiosperm View MSA
122418624 5262 Malpighiales Singleton cluster - no MSA
124211188 5268 Malvidae Singleton cluster - no MSA
123929308 5270 Rosid Singleton cluster - no MSA
123749206 5271 Pentapetalae View MSA
122795293 5272 Eudicot View MSA
121063186 5274 Embryophyte View MSA
123102956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain