Gene : Lus10000788.g L. usitatissimum v1.0
Defline:  (1 of 2) 2.5.1.19 - 3-phosphoshikimate 1-carboxyvinyltransferase / EPSP synthase Genomic Order:  3
Name:  ? Lus10000788.g Secondary Identifier:  ? PAC:23168861
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum ARO-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-6163 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10000788.g 0.5kb upstream 0.5kb upstream 3283 true scaffold304: 17323-20605 Linum usitatissimum
Lus10000788.g 0.5kb upstream 0.5kb upstream 500 false scaffold304: 20106-20605 Linum usitatissimum
Lus10000788.g 0.5kb downstream 0.5kb downstream 3283 true scaffold304: 16823-20105 Linum usitatissimum
Lus10000788.g 0.5kb downstream 0.5kb downstream 500 false scaffold304: 16823-17322 Linum usitatissimum
Lus10000788.g 1.0kb upstream 1.0kb upstream 3783 true scaffold304: 17323-21105 Linum usitatissimum
Lus10000788.g 1.0kb upstream 1.0kb upstream 1000 false scaffold304: 20106-21105 Linum usitatissimum
Lus10000788.g 1.0kb downstream 1.0kb downstream 3783 true scaffold304: 16323-20105 Linum usitatissimum
Lus10000788.g 1.0kb downstream 1.0kb downstream 1000 false scaffold304: 16323-17322 Linum usitatissimum
Lus10000788.g 2.0kb upstream 2.0kb upstream 4783 true scaffold304: 17323-22105 Linum usitatissimum
Lus10000788.g 2.0kb upstream 2.0kb upstream 2000 false scaffold304: 20106-22105 Linum usitatissimum
Lus10000788.g 2.0kb downstream 2.0kb downstream 4783 true scaffold304: 15323-20105 Linum usitatissimum
Lus10000788.g 2.0kb downstream 2.0kb downstream 2000 false scaffold304: 15323-17322 Linum usitatissimum
Lus10000788.g 5.0kb upstream 5.0kb upstream 7783 true scaffold304: 17323-25105 Linum usitatissimum
Lus10000788.g 5.0kb upstream 5.0kb upstream 5000 false scaffold304: 20106-25105 Linum usitatissimum
Lus10000788.g 5.0kb downstream 5.0kb downstream 7783 true scaffold304: 12323-20105 Linum usitatissimum
Lus10000788.g 5.0kb downstream 5.0kb downstream 5000 false scaffold304: 12323-17322 Linum usitatissimum
Lus10000788.g 10.0kb upstream 10.0kb upstream 12783 true scaffold304: 17323-30105 Linum usitatissimum
Lus10000788.g 10.0kb upstream 10.0kb upstream 10000 false scaffold304: 20106-30105 Linum usitatissimum
Lus10000788.g 10.0kb downstream 10.0kb downstream 12783 true scaffold304: 7323-20105 Linum usitatissimum
Lus10000788.g 10.0kb downstream 10.0kb downstream 10000 false scaffold304: 7323-17322 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454284 5262 Malpighiales View MSA
124237707 5268 Malvidae View MSA
124067523 5270 Rosid View MSA
123738347 5271 Pentapetalae View MSA
122792138 5272 Eudicot View MSA
122041964 5273 Angiosperm View MSA
121345789 5274 Embryophyte View MSA
123424749 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain