Gene : Lus10000789.g L. usitatissimum v1.0
Defline:  (1 of 6) 2.2.1.1 - Transketolase / Glycoaldehyde transferase Genomic Order:  4
Name:  ? Lus10000789.g Secondary Identifier:  ? PAC:23168858
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CALVIN-PWY Linum usitatissimum pathologic  
Lusitatissimum NONOXIPENT-PWY Linum usitatissimum pathologic  
Lusitatissimum PENTOSE-P-PWY Linum usitatissimum pathologic  
Lusitatissimum PHOTOALL-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-5723 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10000789.g 0.5kb upstream 0.5kb upstream 3589 true scaffold304: 21288-24876 Linum usitatissimum
Lus10000789.g 0.5kb upstream 0.5kb upstream 500 false scaffold304: 24377-24876 Linum usitatissimum
Lus10000789.g 0.5kb downstream 0.5kb downstream 3589 true scaffold304: 20788-24376 Linum usitatissimum
Lus10000789.g 0.5kb downstream 0.5kb downstream 500 false scaffold304: 20788-21287 Linum usitatissimum
Lus10000789.g 1.0kb upstream 1.0kb upstream 4089 true scaffold304: 21288-25376 Linum usitatissimum
Lus10000789.g 1.0kb upstream 1.0kb upstream 1000 false scaffold304: 24377-25376 Linum usitatissimum
Lus10000789.g 1.0kb downstream 1.0kb downstream 4089 true scaffold304: 20288-24376 Linum usitatissimum
Lus10000789.g 1.0kb downstream 1.0kb downstream 1000 false scaffold304: 20288-21287 Linum usitatissimum
Lus10000789.g 2.0kb upstream 2.0kb upstream 5089 true scaffold304: 21288-26376 Linum usitatissimum
Lus10000789.g 2.0kb upstream 2.0kb upstream 2000 false scaffold304: 24377-26376 Linum usitatissimum
Lus10000789.g 2.0kb downstream 2.0kb downstream 5089 true scaffold304: 19288-24376 Linum usitatissimum
Lus10000789.g 2.0kb downstream 2.0kb downstream 2000 false scaffold304: 19288-21287 Linum usitatissimum
Lus10000789.g 5.0kb upstream 5.0kb upstream 8089 true scaffold304: 21288-29376 Linum usitatissimum
Lus10000789.g 5.0kb upstream 5.0kb upstream 5000 false scaffold304: 24377-29376 Linum usitatissimum
Lus10000789.g 5.0kb downstream 5.0kb downstream 8089 true scaffold304: 16288-24376 Linum usitatissimum
Lus10000789.g 5.0kb downstream 5.0kb downstream 5000 false scaffold304: 16288-21287 Linum usitatissimum
Lus10000789.g 10.0kb upstream 10.0kb upstream 13089 true scaffold304: 21288-34376 Linum usitatissimum
Lus10000789.g 10.0kb upstream 10.0kb upstream 10000 false scaffold304: 24377-34376 Linum usitatissimum
Lus10000789.g 10.0kb downstream 10.0kb downstream 13089 true scaffold304: 11288-24376 Linum usitatissimum
Lus10000789.g 10.0kb downstream 10.0kb downstream 10000 false scaffold304: 11288-21287 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121562884 5273 Angiosperm View MSA
122425412 5262 Malpighiales View MSA
124216887 5268 Malvidae View MSA
123934232 5270 Rosid View MSA
123513254 5271 Pentapetalae View MSA
122548299 5272 Eudicot View MSA
120835458 5274 Embryophyte View MSA
122876782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain