Gene : Lus10037019.g L. usitatissimum v1.0
Defline:  (1 of 1) PF02301//PF03031//PF05755 - HORMA domain (HORMA) // NLI interacting factor-like phosphatase (NIF) // Rubber elongation factor protein (REF) (REF) Genomic Order:  345
Name:  ? Lus10037019.g Secondary Identifier:  ? PAC:23171330
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10037019.g 0.5kb upstream 0.5kb upstream 10113 true scaffold31: 1669289-1679401 Linum usitatissimum
Lus10037019.g 0.5kb upstream 0.5kb upstream 500 false scaffold31: 1669289-1669788 Linum usitatissimum
Lus10037019.g 0.5kb downstream 0.5kb downstream 10113 true scaffold31: 1669789-1679901 Linum usitatissimum
Lus10037019.g 0.5kb downstream 0.5kb downstream 500 false scaffold31: 1679402-1679901 Linum usitatissimum
Lus10037019.g 1.0kb upstream 1.0kb upstream 10613 true scaffold31: 1668789-1679401 Linum usitatissimum
Lus10037019.g 1.0kb upstream 1.0kb upstream 1000 false scaffold31: 1668789-1669788 Linum usitatissimum
Lus10037019.g 1.0kb downstream 1.0kb downstream 10613 true scaffold31: 1669789-1680401 Linum usitatissimum
Lus10037019.g 1.0kb downstream 1.0kb downstream 1000 false scaffold31: 1679402-1680401 Linum usitatissimum
Lus10037019.g 2.0kb upstream 2.0kb upstream 11613 true scaffold31: 1667789-1679401 Linum usitatissimum
Lus10037019.g 2.0kb upstream 2.0kb upstream 2000 false scaffold31: 1667789-1669788 Linum usitatissimum
Lus10037019.g 2.0kb downstream 2.0kb downstream 11613 true scaffold31: 1669789-1681401 Linum usitatissimum
Lus10037019.g 2.0kb downstream 2.0kb downstream 2000 false scaffold31: 1679402-1681401 Linum usitatissimum
Lus10037019.g 5.0kb upstream 5.0kb upstream 14613 true scaffold31: 1664789-1679401 Linum usitatissimum
Lus10037019.g 5.0kb upstream 5.0kb upstream 5000 false scaffold31: 1664789-1669788 Linum usitatissimum
Lus10037019.g 5.0kb downstream 5.0kb downstream 14613 true scaffold31: 1669789-1684401 Linum usitatissimum
Lus10037019.g 5.0kb downstream 5.0kb downstream 5000 false scaffold31: 1679402-1684401 Linum usitatissimum
Lus10037019.g 10.0kb upstream 10.0kb upstream 19613 true scaffold31: 1659789-1679401 Linum usitatissimum
Lus10037019.g 10.0kb upstream 10.0kb upstream 10000 false scaffold31: 1659789-1669788 Linum usitatissimum
Lus10037019.g 10.0kb downstream 10.0kb downstream 19613 true scaffold31: 1669789-1689401 Linum usitatissimum
Lus10037019.g 10.0kb downstream 10.0kb downstream 10000 false scaffold31: 1679402-1689401 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121558944 5273 Angiosperm Singleton cluster - no MSA
122419317 5262 Malpighiales Singleton cluster - no MSA
124211792 5268 Malvidae Singleton cluster - no MSA
123929833 5270 Rosid Singleton cluster - no MSA
123509285 5271 Pentapetalae Singleton cluster - no MSA
122544359 5272 Eudicot Singleton cluster - no MSA
120831518 5274 Embryophyte Singleton cluster - no MSA
122872842 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain