Gene : Lus10034361.g L. usitatissimum v1.0
Defline:  (1 of 1) PF02900 - Catalytic LigB subunit of aromatic ring-opening dioxygenase (LigB) Genomic Order:  166
Name:  ? Lus10034361.g Secondary Identifier:  ? PAC:23175851
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10034361.g 0.5kb upstream 0.5kb upstream 1666 true scaffold310: 897864-899529 Linum usitatissimum
Lus10034361.g 0.5kb upstream 0.5kb upstream 500 false scaffold310: 897864-898363 Linum usitatissimum
Lus10034361.g 0.5kb downstream 0.5kb downstream 1666 true scaffold310: 898364-900029 Linum usitatissimum
Lus10034361.g 0.5kb downstream 0.5kb downstream 500 false scaffold310: 899530-900029 Linum usitatissimum
Lus10034361.g 1.0kb upstream 1.0kb upstream 2166 true scaffold310: 897364-899529 Linum usitatissimum
Lus10034361.g 1.0kb upstream 1.0kb upstream 1000 false scaffold310: 897364-898363 Linum usitatissimum
Lus10034361.g 1.0kb downstream 1.0kb downstream 2166 true scaffold310: 898364-900529 Linum usitatissimum
Lus10034361.g 1.0kb downstream 1.0kb downstream 1000 false scaffold310: 899530-900529 Linum usitatissimum
Lus10034361.g 2.0kb upstream 2.0kb upstream 3166 true scaffold310: 896364-899529 Linum usitatissimum
Lus10034361.g 2.0kb upstream 2.0kb upstream 2000 false scaffold310: 896364-898363 Linum usitatissimum
Lus10034361.g 2.0kb downstream 2.0kb downstream 3166 true scaffold310: 898364-901529 Linum usitatissimum
Lus10034361.g 2.0kb downstream 2.0kb downstream 2000 false scaffold310: 899530-901529 Linum usitatissimum
Lus10034361.g 5.0kb upstream 5.0kb upstream 6166 true scaffold310: 893364-899529 Linum usitatissimum
Lus10034361.g 5.0kb upstream 5.0kb upstream 5000 false scaffold310: 893364-898363 Linum usitatissimum
Lus10034361.g 5.0kb downstream 5.0kb downstream 6166 true scaffold310: 898364-904529 Linum usitatissimum
Lus10034361.g 5.0kb downstream 5.0kb downstream 5000 false scaffold310: 899530-904529 Linum usitatissimum
Lus10034361.g 10.0kb upstream 10.0kb upstream 11166 true scaffold310: 888364-899529 Linum usitatissimum
Lus10034361.g 10.0kb upstream 10.0kb upstream 10000 false scaffold310: 888364-898363 Linum usitatissimum
Lus10034361.g 10.0kb downstream 10.0kb downstream 11166 true scaffold310: 898364-909529 Linum usitatissimum
Lus10034361.g 10.0kb downstream 10.0kb downstream 10000 false scaffold310: 899530-909529 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426438 5262 Malpighiales View MSA
124250769 5268 Malvidae View MSA
124061164 5270 Rosid View MSA
123748112 5271 Pentapetalae View MSA
122788148 5272 Eudicot View MSA
122046323 5273 Angiosperm View MSA
121350065 5274 Embryophyte View MSA
123426386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain