Gene : Lus10025949.g L. usitatissimum v1.0
Defline:  (1 of 15) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  8
Name:  ? Lus10025949.g Secondary Identifier:  ? PAC:23173211
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10025949.g 0.5kb upstream 0.5kb upstream 728 true scaffold319: 36309-37036 Linum usitatissimum
Lus10025949.g 0.5kb upstream 0.5kb upstream 500 false scaffold319: 36309-36808 Linum usitatissimum
Lus10025949.g 0.5kb downstream 0.5kb downstream 728 true scaffold319: 36809-37536 Linum usitatissimum
Lus10025949.g 0.5kb downstream 0.5kb downstream 500 false scaffold319: 37037-37536 Linum usitatissimum
Lus10025949.g 1.0kb upstream 1.0kb upstream 1228 true scaffold319: 35809-37036 Linum usitatissimum
Lus10025949.g 1.0kb upstream 1.0kb upstream 1000 false scaffold319: 35809-36808 Linum usitatissimum
Lus10025949.g 1.0kb downstream 1.0kb downstream 1228 true scaffold319: 36809-38036 Linum usitatissimum
Lus10025949.g 1.0kb downstream 1.0kb downstream 1000 false scaffold319: 37037-38036 Linum usitatissimum
Lus10025949.g 2.0kb upstream 2.0kb upstream 2228 true scaffold319: 34809-37036 Linum usitatissimum
Lus10025949.g 2.0kb upstream 2.0kb upstream 2000 false scaffold319: 34809-36808 Linum usitatissimum
Lus10025949.g 2.0kb downstream 2.0kb downstream 2228 true scaffold319: 36809-39036 Linum usitatissimum
Lus10025949.g 2.0kb downstream 2.0kb downstream 2000 false scaffold319: 37037-39036 Linum usitatissimum
Lus10025949.g 5.0kb upstream 5.0kb upstream 5228 true scaffold319: 31809-37036 Linum usitatissimum
Lus10025949.g 5.0kb upstream 5.0kb upstream 5000 false scaffold319: 31809-36808 Linum usitatissimum
Lus10025949.g 5.0kb downstream 5.0kb downstream 5228 true scaffold319: 36809-42036 Linum usitatissimum
Lus10025949.g 5.0kb downstream 5.0kb downstream 5000 false scaffold319: 37037-42036 Linum usitatissimum
Lus10025949.g 10.0kb upstream 10.0kb upstream 10228 true scaffold319: 26809-37036 Linum usitatissimum
Lus10025949.g 10.0kb upstream 10.0kb upstream 10000 false scaffold319: 26809-36808 Linum usitatissimum
Lus10025949.g 10.0kb downstream 10.0kb downstream 10228 true scaffold319: 36809-47036 Linum usitatissimum
Lus10025949.g 10.0kb downstream 10.0kb downstream 10000 false scaffold319: 37037-47036 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461437 5262 Malpighiales View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain