Gene : Lus10028218.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11680:SF12 - SERINE HYDROXYMETHYLTRANSFERASE 2, MITOCHONDRIAL Genomic Order:  110
Name:  ? Lus10028218.g Secondary Identifier:  ? PAC:23166488
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLYSYN-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-2161 Linum usitatissimum pathologic  
Lusitatissimum PWY-3841 Linum usitatissimum pathologic  
Lusitatissimum SER-GLYSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10028218.g 0.5kb upstream 0.5kb upstream 4327 true scaffold327: 626433-630759 Linum usitatissimum
Lus10028218.g 0.5kb upstream 0.5kb upstream 500 false scaffold327: 626433-626932 Linum usitatissimum
Lus10028218.g 0.5kb downstream 0.5kb downstream 4327 true scaffold327: 626933-631259 Linum usitatissimum
Lus10028218.g 0.5kb downstream 0.5kb downstream 500 false scaffold327: 630760-631259 Linum usitatissimum
Lus10028218.g 1.0kb upstream 1.0kb upstream 4827 true scaffold327: 625933-630759 Linum usitatissimum
Lus10028218.g 1.0kb upstream 1.0kb upstream 1000 false scaffold327: 625933-626932 Linum usitatissimum
Lus10028218.g 1.0kb downstream 1.0kb downstream 4827 true scaffold327: 626933-631759 Linum usitatissimum
Lus10028218.g 1.0kb downstream 1.0kb downstream 1000 false scaffold327: 630760-631759 Linum usitatissimum
Lus10028218.g 2.0kb upstream 2.0kb upstream 5827 true scaffold327: 624933-630759 Linum usitatissimum
Lus10028218.g 2.0kb upstream 2.0kb upstream 2000 false scaffold327: 624933-626932 Linum usitatissimum
Lus10028218.g 2.0kb downstream 2.0kb downstream 5827 true scaffold327: 626933-632759 Linum usitatissimum
Lus10028218.g 2.0kb downstream 2.0kb downstream 2000 false scaffold327: 630760-632759 Linum usitatissimum
Lus10028218.g 5.0kb upstream 5.0kb upstream 8827 true scaffold327: 621933-630759 Linum usitatissimum
Lus10028218.g 5.0kb upstream 5.0kb upstream 5000 false scaffold327: 621933-626932 Linum usitatissimum
Lus10028218.g 5.0kb downstream 5.0kb downstream 8827 true scaffold327: 626933-635759 Linum usitatissimum
Lus10028218.g 5.0kb downstream 5.0kb downstream 5000 false scaffold327: 630760-635759 Linum usitatissimum
Lus10028218.g 10.0kb upstream 10.0kb upstream 13827 true scaffold327: 616933-630759 Linum usitatissimum
Lus10028218.g 10.0kb upstream 10.0kb upstream 10000 false scaffold327: 616933-626932 Linum usitatissimum
Lus10028218.g 10.0kb downstream 10.0kb downstream 13827 true scaffold327: 626933-640759 Linum usitatissimum
Lus10028218.g 10.0kb downstream 10.0kb downstream 10000 false scaffold327: 630760-640759 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449832 5262 Malpighiales View MSA
124239143 5268 Malvidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain