Gene : Lus10039202.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR10315:SF45 - E3 UBIQUITIN-PROTEIN LIGASE Genomic Order:  478
Name:  ? Lus10039202.g Secondary Identifier:  ? PAC:23150400
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10039202.g 0.5kb upstream 0.5kb upstream 1707 true scaffold34: 2081057-2082763 Linum usitatissimum
Lus10039202.g 0.5kb upstream 0.5kb upstream 500 false scaffold34: 2081057-2081556 Linum usitatissimum
Lus10039202.g 0.5kb downstream 0.5kb downstream 1707 true scaffold34: 2081557-2083263 Linum usitatissimum
Lus10039202.g 0.5kb downstream 0.5kb downstream 500 false scaffold34: 2082764-2083263 Linum usitatissimum
Lus10039202.g 1.0kb upstream 1.0kb upstream 2207 true scaffold34: 2080557-2082763 Linum usitatissimum
Lus10039202.g 1.0kb upstream 1.0kb upstream 1000 false scaffold34: 2080557-2081556 Linum usitatissimum
Lus10039202.g 1.0kb downstream 1.0kb downstream 2207 true scaffold34: 2081557-2083763 Linum usitatissimum
Lus10039202.g 1.0kb downstream 1.0kb downstream 1000 false scaffold34: 2082764-2083763 Linum usitatissimum
Lus10039202.g 2.0kb upstream 2.0kb upstream 3207 true scaffold34: 2079557-2082763 Linum usitatissimum
Lus10039202.g 2.0kb upstream 2.0kb upstream 2000 false scaffold34: 2079557-2081556 Linum usitatissimum
Lus10039202.g 2.0kb downstream 2.0kb downstream 3207 true scaffold34: 2081557-2084763 Linum usitatissimum
Lus10039202.g 2.0kb downstream 2.0kb downstream 2000 false scaffold34: 2082764-2084763 Linum usitatissimum
Lus10039202.g 5.0kb upstream 5.0kb upstream 6207 true scaffold34: 2076557-2082763 Linum usitatissimum
Lus10039202.g 5.0kb upstream 5.0kb upstream 5000 false scaffold34: 2076557-2081556 Linum usitatissimum
Lus10039202.g 5.0kb downstream 5.0kb downstream 6207 true scaffold34: 2081557-2087763 Linum usitatissimum
Lus10039202.g 5.0kb downstream 5.0kb downstream 5000 false scaffold34: 2082764-2087763 Linum usitatissimum
Lus10039202.g 10.0kb upstream 10.0kb upstream 11207 true scaffold34: 2071557-2082763 Linum usitatissimum
Lus10039202.g 10.0kb upstream 10.0kb upstream 10000 false scaffold34: 2071557-2081556 Linum usitatissimum
Lus10039202.g 10.0kb downstream 10.0kb downstream 11207 true scaffold34: 2081557-2092763 Linum usitatissimum
Lus10039202.g 10.0kb downstream 10.0kb downstream 10000 false scaffold34: 2082764-2092763 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461408 5262 Malpighiales View MSA
124246222 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain