Gene : Lus10024041.g L. usitatissimum v1.0
Defline:  (1 of 1) PF00133//PF03372//PF08264 - tRNA synthetases class I (I, L, M and V) (tRNA-synt_1) // Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) // Anticodon-binding domain of tRNA (Anticodon_1) Genomic Order:  33
Name:  ? Lus10024041.g Secondary Identifier:  ? PAC:23141572
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10024041.g 0.5kb upstream 0.5kb upstream 13462 true scaffold353: 183462-196923 Linum usitatissimum
Lus10024041.g 0.5kb upstream 0.5kb upstream 500 false scaffold353: 196424-196923 Linum usitatissimum
Lus10024041.g 0.5kb downstream 0.5kb downstream 13462 true scaffold353: 182962-196423 Linum usitatissimum
Lus10024041.g 0.5kb downstream 0.5kb downstream 500 false scaffold353: 182962-183461 Linum usitatissimum
Lus10024041.g 1.0kb upstream 1.0kb upstream 13962 true scaffold353: 183462-197423 Linum usitatissimum
Lus10024041.g 1.0kb upstream 1.0kb upstream 1000 false scaffold353: 196424-197423 Linum usitatissimum
Lus10024041.g 1.0kb downstream 1.0kb downstream 13962 true scaffold353: 182462-196423 Linum usitatissimum
Lus10024041.g 1.0kb downstream 1.0kb downstream 1000 false scaffold353: 182462-183461 Linum usitatissimum
Lus10024041.g 2.0kb upstream 2.0kb upstream 14962 true scaffold353: 183462-198423 Linum usitatissimum
Lus10024041.g 2.0kb upstream 2.0kb upstream 2000 false scaffold353: 196424-198423 Linum usitatissimum
Lus10024041.g 2.0kb downstream 2.0kb downstream 14962 true scaffold353: 181462-196423 Linum usitatissimum
Lus10024041.g 2.0kb downstream 2.0kb downstream 2000 false scaffold353: 181462-183461 Linum usitatissimum
Lus10024041.g 5.0kb upstream 5.0kb upstream 17962 true scaffold353: 183462-201423 Linum usitatissimum
Lus10024041.g 5.0kb upstream 5.0kb upstream 5000 false scaffold353: 196424-201423 Linum usitatissimum
Lus10024041.g 5.0kb downstream 5.0kb downstream 17962 true scaffold353: 178462-196423 Linum usitatissimum
Lus10024041.g 5.0kb downstream 5.0kb downstream 5000 false scaffold353: 178462-183461 Linum usitatissimum
Lus10024041.g 10.0kb upstream 10.0kb upstream 22962 true scaffold353: 183462-206423 Linum usitatissimum
Lus10024041.g 10.0kb upstream 10.0kb upstream 10000 false scaffold353: 196424-206423 Linum usitatissimum
Lus10024041.g 10.0kb downstream 10.0kb downstream 22962 true scaffold353: 173462-196423 Linum usitatissimum
Lus10024041.g 10.0kb downstream 10.0kb downstream 10000 false scaffold353: 173462-183461 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041086 5273 Angiosperm View MSA
122450303 5262 Malpighiales View MSA
124238585 5268 Malvidae View MSA
124063415 5270 Rosid View MSA
123737064 5271 Pentapetalae View MSA
122787980 5272 Eudicot View MSA
121346625 5274 Embryophyte View MSA
123428554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain