Gene : Lus10022943.g L. usitatissimum v1.0
Defline:  (1 of 16) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  4
Name:  ? Lus10022943.g Secondary Identifier:  ? PAC:23146118
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-3781 Linum usitatissimum pathologic  
Lusitatissimum PWY-4302 Linum usitatissimum pathologic  
Lusitatissimum PWY-5083 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10022943.g 0.5kb upstream 0.5kb upstream 26537 true scaffold355: 17289-43825 Linum usitatissimum
Lus10022943.g 0.5kb upstream 0.5kb upstream 500 false scaffold355: 17289-17788 Linum usitatissimum
Lus10022943.g 0.5kb downstream 0.5kb downstream 26537 true scaffold355: 17789-44325 Linum usitatissimum
Lus10022943.g 0.5kb downstream 0.5kb downstream 500 false scaffold355: 43826-44325 Linum usitatissimum
Lus10022943.g 1.0kb upstream 1.0kb upstream 27037 true scaffold355: 16789-43825 Linum usitatissimum
Lus10022943.g 1.0kb upstream 1.0kb upstream 1000 false scaffold355: 16789-17788 Linum usitatissimum
Lus10022943.g 1.0kb downstream 1.0kb downstream 27037 true scaffold355: 17789-44825 Linum usitatissimum
Lus10022943.g 1.0kb downstream 1.0kb downstream 1000 false scaffold355: 43826-44825 Linum usitatissimum
Lus10022943.g 2.0kb upstream 2.0kb upstream 28037 true scaffold355: 15789-43825 Linum usitatissimum
Lus10022943.g 2.0kb upstream 2.0kb upstream 2000 false scaffold355: 15789-17788 Linum usitatissimum
Lus10022943.g 2.0kb downstream 2.0kb downstream 28037 true scaffold355: 17789-45825 Linum usitatissimum
Lus10022943.g 2.0kb downstream 2.0kb downstream 2000 false scaffold355: 43826-45825 Linum usitatissimum
Lus10022943.g 5.0kb upstream 5.0kb upstream 31037 true scaffold355: 12789-43825 Linum usitatissimum
Lus10022943.g 5.0kb upstream 5.0kb upstream 5000 false scaffold355: 12789-17788 Linum usitatissimum
Lus10022943.g 5.0kb downstream 5.0kb downstream 31037 true scaffold355: 17789-48825 Linum usitatissimum
Lus10022943.g 5.0kb downstream 5.0kb downstream 5000 false scaffold355: 43826-48825 Linum usitatissimum
Lus10022943.g 10.0kb upstream 10.0kb upstream 36037 true scaffold355: 7789-43825 Linum usitatissimum
Lus10022943.g 10.0kb upstream 10.0kb upstream 10000 false scaffold355: 7789-17788 Linum usitatissimum
Lus10022943.g 10.0kb downstream 10.0kb downstream 36037 true scaffold355: 17789-53825 Linum usitatissimum
Lus10022943.g 10.0kb downstream 10.0kb downstream 10000 false scaffold355: 43826-53825 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457987 5262 Malpighiales View MSA
124251074 5268 Malvidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain