Gene : Lus10013117.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11624:SF64 - 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEIN Genomic Order:  7
Name:  ? Lus10013117.g Secondary Identifier:  ? PAC:23164133
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7560 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10013117.g 0.5kb upstream 0.5kb upstream 3916 true scaffold359: 45045-48960 Linum usitatissimum
Lus10013117.g 0.5kb upstream 0.5kb upstream 500 false scaffold359: 48461-48960 Linum usitatissimum
Lus10013117.g 0.5kb downstream 0.5kb downstream 3916 true scaffold359: 44545-48460 Linum usitatissimum
Lus10013117.g 0.5kb downstream 0.5kb downstream 500 false scaffold359: 44545-45044 Linum usitatissimum
Lus10013117.g 1.0kb upstream 1.0kb upstream 4416 true scaffold359: 45045-49460 Linum usitatissimum
Lus10013117.g 1.0kb upstream 1.0kb upstream 1000 false scaffold359: 48461-49460 Linum usitatissimum
Lus10013117.g 1.0kb downstream 1.0kb downstream 4416 true scaffold359: 44045-48460 Linum usitatissimum
Lus10013117.g 1.0kb downstream 1.0kb downstream 1000 false scaffold359: 44045-45044 Linum usitatissimum
Lus10013117.g 2.0kb upstream 2.0kb upstream 5416 true scaffold359: 45045-50460 Linum usitatissimum
Lus10013117.g 2.0kb upstream 2.0kb upstream 2000 false scaffold359: 48461-50460 Linum usitatissimum
Lus10013117.g 2.0kb downstream 2.0kb downstream 5416 true scaffold359: 43045-48460 Linum usitatissimum
Lus10013117.g 2.0kb downstream 2.0kb downstream 2000 false scaffold359: 43045-45044 Linum usitatissimum
Lus10013117.g 5.0kb upstream 5.0kb upstream 8416 true scaffold359: 45045-53460 Linum usitatissimum
Lus10013117.g 5.0kb upstream 5.0kb upstream 5000 false scaffold359: 48461-53460 Linum usitatissimum
Lus10013117.g 5.0kb downstream 5.0kb downstream 8416 true scaffold359: 40045-48460 Linum usitatissimum
Lus10013117.g 5.0kb downstream 5.0kb downstream 5000 false scaffold359: 40045-45044 Linum usitatissimum
Lus10013117.g 10.0kb upstream 10.0kb upstream 13416 true scaffold359: 45045-58460 Linum usitatissimum
Lus10013117.g 10.0kb upstream 10.0kb upstream 10000 false scaffold359: 48461-58460 Linum usitatissimum
Lus10013117.g 10.0kb downstream 10.0kb downstream 13416 true scaffold359: 35045-48460 Linum usitatissimum
Lus10013117.g 10.0kb downstream 10.0kb downstream 10000 false scaffold359: 35045-45044 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451696 5262 Malpighiales View MSA
124239225 5268 Malvidae View MSA
124066019 5270 Rosid View MSA
123737503 5271 Pentapetalae View MSA
122791788 5272 Eudicot View MSA
122044949 5273 Angiosperm View MSA
121310367 5274 Embryophyte View MSA
123347869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain