Gene : Lus10021533.g L. usitatissimum v1.0
Defline:  (1 of 8) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  16
Name:  ? Lus10021533.g Secondary Identifier:  ? PAC:23159080
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLYOXYLATE-BYPASS Linum usitatissimum pathologic  
Lusitatissimum PWY-5464 Linum usitatissimum pathologic  
Lusitatissimum PWY-561 Linum usitatissimum pathologic  
Lusitatissimum PWY-5690 Linum usitatissimum pathologic  
Lusitatissimum PWY-6549 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10021533.g 0.5kb upstream 0.5kb upstream 6547 true scaffold362: 230708-237254 Linum usitatissimum
Lus10021533.g 0.5kb upstream 0.5kb upstream 500 false scaffold362: 236755-237254 Linum usitatissimum
Lus10021533.g 0.5kb downstream 0.5kb downstream 6547 true scaffold362: 230208-236754 Linum usitatissimum
Lus10021533.g 0.5kb downstream 0.5kb downstream 500 false scaffold362: 230208-230707 Linum usitatissimum
Lus10021533.g 1.0kb upstream 1.0kb upstream 7047 true scaffold362: 230708-237754 Linum usitatissimum
Lus10021533.g 1.0kb upstream 1.0kb upstream 1000 false scaffold362: 236755-237754 Linum usitatissimum
Lus10021533.g 1.0kb downstream 1.0kb downstream 7047 true scaffold362: 229708-236754 Linum usitatissimum
Lus10021533.g 1.0kb downstream 1.0kb downstream 1000 false scaffold362: 229708-230707 Linum usitatissimum
Lus10021533.g 2.0kb upstream 2.0kb upstream 8047 true scaffold362: 230708-238754 Linum usitatissimum
Lus10021533.g 2.0kb upstream 2.0kb upstream 2000 false scaffold362: 236755-238754 Linum usitatissimum
Lus10021533.g 2.0kb downstream 2.0kb downstream 8047 true scaffold362: 228708-236754 Linum usitatissimum
Lus10021533.g 2.0kb downstream 2.0kb downstream 2000 false scaffold362: 228708-230707 Linum usitatissimum
Lus10021533.g 5.0kb upstream 5.0kb upstream 11047 true scaffold362: 230708-241754 Linum usitatissimum
Lus10021533.g 5.0kb upstream 5.0kb upstream 5000 false scaffold362: 236755-241754 Linum usitatissimum
Lus10021533.g 5.0kb downstream 5.0kb downstream 11047 true scaffold362: 225708-236754 Linum usitatissimum
Lus10021533.g 5.0kb downstream 5.0kb downstream 5000 false scaffold362: 225708-230707 Linum usitatissimum
Lus10021533.g 10.0kb upstream 10.0kb upstream 16047 true scaffold362: 230708-246754 Linum usitatissimum
Lus10021533.g 10.0kb upstream 10.0kb upstream 10000 false scaffold362: 236755-246754 Linum usitatissimum
Lus10021533.g 10.0kb downstream 10.0kb downstream 16047 true scaffold362: 220708-236754 Linum usitatissimum
Lus10021533.g 10.0kb downstream 10.0kb downstream 10000 false scaffold362: 220708-230707 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450937 5262 Malpighiales View MSA
124253803 5268 Malvidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain