Gene : Lus10028991.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR13069:SF11 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6 Genomic Order:  5
Name:  ? Lus10028991.g Secondary Identifier:  ? PAC:23151836
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-6829 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10028991.g 0.5kb upstream 0.5kb upstream 1804 true scaffold376: 13349-15152 Linum usitatissimum
Lus10028991.g 0.5kb upstream 0.5kb upstream 500 false scaffold376: 13349-13848 Linum usitatissimum
Lus10028991.g 0.5kb downstream 0.5kb downstream 1804 true scaffold376: 13849-15652 Linum usitatissimum
Lus10028991.g 0.5kb downstream 0.5kb downstream 500 false scaffold376: 15153-15652 Linum usitatissimum
Lus10028991.g 1.0kb upstream 1.0kb upstream 2304 true scaffold376: 12849-15152 Linum usitatissimum
Lus10028991.g 1.0kb upstream 1.0kb upstream 1000 false scaffold376: 12849-13848 Linum usitatissimum
Lus10028991.g 1.0kb downstream 1.0kb downstream 2304 true scaffold376: 13849-16152 Linum usitatissimum
Lus10028991.g 1.0kb downstream 1.0kb downstream 1000 false scaffold376: 15153-16152 Linum usitatissimum
Lus10028991.g 2.0kb upstream 2.0kb upstream 3304 true scaffold376: 11849-15152 Linum usitatissimum
Lus10028991.g 2.0kb upstream 2.0kb upstream 2000 false scaffold376: 11849-13848 Linum usitatissimum
Lus10028991.g 2.0kb downstream 2.0kb downstream 3304 true scaffold376: 13849-17152 Linum usitatissimum
Lus10028991.g 2.0kb downstream 2.0kb downstream 2000 false scaffold376: 15153-17152 Linum usitatissimum
Lus10028991.g 5.0kb upstream 5.0kb upstream 6304 true scaffold376: 8849-15152 Linum usitatissimum
Lus10028991.g 5.0kb upstream 5.0kb upstream 5000 false scaffold376: 8849-13848 Linum usitatissimum
Lus10028991.g 5.0kb downstream 5.0kb downstream 6304 true scaffold376: 13849-20152 Linum usitatissimum
Lus10028991.g 5.0kb downstream 5.0kb downstream 5000 false scaffold376: 15153-20152 Linum usitatissimum
Lus10028991.g 10.0kb upstream 10.0kb upstream 11304 true scaffold376: 3849-15152 Linum usitatissimum
Lus10028991.g 10.0kb upstream 10.0kb upstream 10000 false scaffold376: 3849-13848 Linum usitatissimum
Lus10028991.g 10.0kb downstream 10.0kb downstream 11304 true scaffold376: 13849-25152 Linum usitatissimum
Lus10028991.g 10.0kb downstream 10.0kb downstream 10000 false scaffold376: 15153-25152 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453061 5262 Malpighiales View MSA
124239519 5268 Malvidae View MSA
124065403 5270 Rosid View MSA
123740890 5271 Pentapetalae View MSA
122791933 5272 Eudicot View MSA
122044180 5273 Angiosperm View MSA
121345583 5274 Embryophyte View MSA
123428839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain