Gene : Lus10029079.g L. usitatissimum v1.0
Defline:  (1 of 1) PF00646//PF14632//PF14633//PF14635//PF14639//PF14641//PF14878 - F-box domain (F-box) // Acidic N-terminal SPT6 (SPT6_acidic) // SH2 domain (SH2_2) // Helix-hairpin-helix motif (HHH_7) // Holliday-junction resolvase-like of SPT6 (YqgF) // Helix-turn-helix DNA-binding domain of SPT6 (HTH_44) // Death-like domain of SPT6 (DLD) Genomic Order:  93
Name:  ? Lus10029079.g Secondary Identifier:  ? PAC:23151742
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10029079.g 0.5kb upstream 0.5kb upstream 8130 true scaffold376: 413700-421829 Linum usitatissimum
Lus10029079.g 0.5kb upstream 0.5kb upstream 500 false scaffold376: 421330-421829 Linum usitatissimum
Lus10029079.g 0.5kb downstream 0.5kb downstream 8130 true scaffold376: 413200-421329 Linum usitatissimum
Lus10029079.g 0.5kb downstream 0.5kb downstream 500 false scaffold376: 413200-413699 Linum usitatissimum
Lus10029079.g 1.0kb upstream 1.0kb upstream 8630 true scaffold376: 413700-422329 Linum usitatissimum
Lus10029079.g 1.0kb upstream 1.0kb upstream 1000 false scaffold376: 421330-422329 Linum usitatissimum
Lus10029079.g 1.0kb downstream 1.0kb downstream 8630 true scaffold376: 412700-421329 Linum usitatissimum
Lus10029079.g 1.0kb downstream 1.0kb downstream 1000 false scaffold376: 412700-413699 Linum usitatissimum
Lus10029079.g 2.0kb upstream 2.0kb upstream 9630 true scaffold376: 413700-423329 Linum usitatissimum
Lus10029079.g 2.0kb upstream 2.0kb upstream 2000 false scaffold376: 421330-423329 Linum usitatissimum
Lus10029079.g 2.0kb downstream 2.0kb downstream 9630 true scaffold376: 411700-421329 Linum usitatissimum
Lus10029079.g 2.0kb downstream 2.0kb downstream 2000 false scaffold376: 411700-413699 Linum usitatissimum
Lus10029079.g 5.0kb upstream 5.0kb upstream 12630 true scaffold376: 413700-426329 Linum usitatissimum
Lus10029079.g 5.0kb upstream 5.0kb upstream 5000 false scaffold376: 421330-426329 Linum usitatissimum
Lus10029079.g 5.0kb downstream 5.0kb downstream 12630 true scaffold376: 408700-421329 Linum usitatissimum
Lus10029079.g 5.0kb downstream 5.0kb downstream 5000 false scaffold376: 408700-413699 Linum usitatissimum
Lus10029079.g 10.0kb upstream 10.0kb upstream 17630 true scaffold376: 413700-431329 Linum usitatissimum
Lus10029079.g 10.0kb upstream 10.0kb upstream 10000 false scaffold376: 421330-431329 Linum usitatissimum
Lus10029079.g 10.0kb downstream 10.0kb downstream 17630 true scaffold376: 403700-421329 Linum usitatissimum
Lus10029079.g 10.0kb downstream 10.0kb downstream 10000 false scaffold376: 403700-413699 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121559653 5273 Angiosperm Singleton cluster - no MSA
122420329 5262 Malpighiales Singleton cluster - no MSA
124212680 5268 Malvidae Singleton cluster - no MSA
123930623 5270 Rosid Singleton cluster - no MSA
123510000 5271 Pentapetalae Singleton cluster - no MSA
122545068 5272 Eudicot Singleton cluster - no MSA
120832227 5274 Embryophyte Singleton cluster - no MSA
122873551 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain