Gene : Lus10028508.g L. usitatissimum v1.0
Defline:  (1 of 18) 2.5.1.29 - Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  208
Name:  ? Lus10028508.g Secondary Identifier:  ? PAC:23166048
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-5120 Linum usitatissimum pathologic  
Lusitatissimum PWY-5910 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10028508.g 0.5kb upstream 0.5kb upstream 1941 true scaffold413: 964317-966257 Linum usitatissimum
Lus10028508.g 0.5kb upstream 0.5kb upstream 500 false scaffold413: 964317-964816 Linum usitatissimum
Lus10028508.g 0.5kb downstream 0.5kb downstream 1941 true scaffold413: 964817-966757 Linum usitatissimum
Lus10028508.g 0.5kb downstream 0.5kb downstream 500 false scaffold413: 966258-966757 Linum usitatissimum
Lus10028508.g 1.0kb upstream 1.0kb upstream 2441 true scaffold413: 963817-966257 Linum usitatissimum
Lus10028508.g 1.0kb upstream 1.0kb upstream 1000 false scaffold413: 963817-964816 Linum usitatissimum
Lus10028508.g 1.0kb downstream 1.0kb downstream 2441 true scaffold413: 964817-967257 Linum usitatissimum
Lus10028508.g 1.0kb downstream 1.0kb downstream 1000 false scaffold413: 966258-967257 Linum usitatissimum
Lus10028508.g 2.0kb upstream 2.0kb upstream 3441 true scaffold413: 962817-966257 Linum usitatissimum
Lus10028508.g 2.0kb upstream 2.0kb upstream 2000 false scaffold413: 962817-964816 Linum usitatissimum
Lus10028508.g 2.0kb downstream 2.0kb downstream 3441 true scaffold413: 964817-968257 Linum usitatissimum
Lus10028508.g 2.0kb downstream 2.0kb downstream 2000 false scaffold413: 966258-968257 Linum usitatissimum
Lus10028508.g 5.0kb upstream 5.0kb upstream 6441 true scaffold413: 959817-966257 Linum usitatissimum
Lus10028508.g 5.0kb upstream 5.0kb upstream 5000 false scaffold413: 959817-964816 Linum usitatissimum
Lus10028508.g 5.0kb downstream 5.0kb downstream 6441 true scaffold413: 964817-971257 Linum usitatissimum
Lus10028508.g 5.0kb downstream 5.0kb downstream 5000 false scaffold413: 966258-971257 Linum usitatissimum
Lus10028508.g 10.0kb upstream 10.0kb upstream 11441 true scaffold413: 954817-966257 Linum usitatissimum
Lus10028508.g 10.0kb upstream 10.0kb upstream 10000 false scaffold413: 954817-964816 Linum usitatissimum
Lus10028508.g 10.0kb downstream 10.0kb downstream 11441 true scaffold413: 964817-976257 Linum usitatissimum
Lus10028508.g 10.0kb downstream 10.0kb downstream 10000 false scaffold413: 966258-976257 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122424794 5262 Malpighiales View MSA
124256738 5268 Malvidae View MSA
124062615 5270 Rosid View MSA
123750127 5271 Pentapetalae View MSA
122794006 5272 Eudicot View MSA
122045672 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain