Gene : Lus10028506.g L. usitatissimum v1.0
Defline:  (1 of 18) 2.5.1.29 - Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  206
Name:  ? Lus10028506.g Secondary Identifier:  ? PAC:23166096
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-5120 Linum usitatissimum pathologic  
Lusitatissimum PWY-5910 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10028506.g 0.5kb upstream 0.5kb upstream 2269 true scaffold413: 957928-960196 Linum usitatissimum
Lus10028506.g 0.5kb upstream 0.5kb upstream 500 false scaffold413: 957928-958427 Linum usitatissimum
Lus10028506.g 0.5kb downstream 0.5kb downstream 2269 true scaffold413: 958428-960696 Linum usitatissimum
Lus10028506.g 0.5kb downstream 0.5kb downstream 500 false scaffold413: 960197-960696 Linum usitatissimum
Lus10028506.g 1.0kb upstream 1.0kb upstream 2769 true scaffold413: 957428-960196 Linum usitatissimum
Lus10028506.g 1.0kb upstream 1.0kb upstream 1000 false scaffold413: 957428-958427 Linum usitatissimum
Lus10028506.g 1.0kb downstream 1.0kb downstream 2769 true scaffold413: 958428-961196 Linum usitatissimum
Lus10028506.g 1.0kb downstream 1.0kb downstream 1000 false scaffold413: 960197-961196 Linum usitatissimum
Lus10028506.g 2.0kb upstream 2.0kb upstream 3769 true scaffold413: 956428-960196 Linum usitatissimum
Lus10028506.g 2.0kb upstream 2.0kb upstream 2000 false scaffold413: 956428-958427 Linum usitatissimum
Lus10028506.g 2.0kb downstream 2.0kb downstream 3769 true scaffold413: 958428-962196 Linum usitatissimum
Lus10028506.g 2.0kb downstream 2.0kb downstream 2000 false scaffold413: 960197-962196 Linum usitatissimum
Lus10028506.g 5.0kb upstream 5.0kb upstream 6769 true scaffold413: 953428-960196 Linum usitatissimum
Lus10028506.g 5.0kb upstream 5.0kb upstream 5000 false scaffold413: 953428-958427 Linum usitatissimum
Lus10028506.g 5.0kb downstream 5.0kb downstream 6769 true scaffold413: 958428-965196 Linum usitatissimum
Lus10028506.g 5.0kb downstream 5.0kb downstream 5000 false scaffold413: 960197-965196 Linum usitatissimum
Lus10028506.g 10.0kb upstream 10.0kb upstream 11769 true scaffold413: 948428-960196 Linum usitatissimum
Lus10028506.g 10.0kb upstream 10.0kb upstream 10000 false scaffold413: 948428-958427 Linum usitatissimum
Lus10028506.g 10.0kb downstream 10.0kb downstream 11769 true scaffold413: 958428-970196 Linum usitatissimum
Lus10028506.g 10.0kb downstream 10.0kb downstream 10000 false scaffold413: 960197-970196 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122420538 5262 Malpighiales Singleton cluster - no MSA
124251250 5268 Malvidae View MSA
124051358 5270 Rosid View MSA
123745518 5271 Pentapetalae View MSA
122795597 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain