Gene : Lus10032112.g L. usitatissimum v1.0
Defline:  (1 of 15) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  202
Name:  ? Lus10032112.g Secondary Identifier:  ? PAC:23161237
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10032112.g 0.5kb upstream 0.5kb upstream 1458 true scaffold42: 947461-948918 Linum usitatissimum
Lus10032112.g 0.5kb upstream 0.5kb upstream 500 false scaffold42: 948419-948918 Linum usitatissimum
Lus10032112.g 0.5kb downstream 0.5kb downstream 1458 true scaffold42: 946961-948418 Linum usitatissimum
Lus10032112.g 0.5kb downstream 0.5kb downstream 500 false scaffold42: 946961-947460 Linum usitatissimum
Lus10032112.g 1.0kb upstream 1.0kb upstream 1958 true scaffold42: 947461-949418 Linum usitatissimum
Lus10032112.g 1.0kb upstream 1.0kb upstream 1000 false scaffold42: 948419-949418 Linum usitatissimum
Lus10032112.g 1.0kb downstream 1.0kb downstream 1958 true scaffold42: 946461-948418 Linum usitatissimum
Lus10032112.g 1.0kb downstream 1.0kb downstream 1000 false scaffold42: 946461-947460 Linum usitatissimum
Lus10032112.g 2.0kb upstream 2.0kb upstream 2958 true scaffold42: 947461-950418 Linum usitatissimum
Lus10032112.g 2.0kb upstream 2.0kb upstream 2000 false scaffold42: 948419-950418 Linum usitatissimum
Lus10032112.g 2.0kb downstream 2.0kb downstream 2958 true scaffold42: 945461-948418 Linum usitatissimum
Lus10032112.g 2.0kb downstream 2.0kb downstream 2000 false scaffold42: 945461-947460 Linum usitatissimum
Lus10032112.g 5.0kb upstream 5.0kb upstream 5958 true scaffold42: 947461-953418 Linum usitatissimum
Lus10032112.g 5.0kb upstream 5.0kb upstream 5000 false scaffold42: 948419-953418 Linum usitatissimum
Lus10032112.g 5.0kb downstream 5.0kb downstream 5958 true scaffold42: 942461-948418 Linum usitatissimum
Lus10032112.g 5.0kb downstream 5.0kb downstream 5000 false scaffold42: 942461-947460 Linum usitatissimum
Lus10032112.g 10.0kb upstream 10.0kb upstream 10958 true scaffold42: 947461-958418 Linum usitatissimum
Lus10032112.g 10.0kb upstream 10.0kb upstream 10000 false scaffold42: 948419-958418 Linum usitatissimum
Lus10032112.g 10.0kb downstream 10.0kb downstream 10958 true scaffold42: 937461-948418 Linum usitatissimum
Lus10032112.g 10.0kb downstream 10.0kb downstream 10000 false scaffold42: 937461-947460 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461437 5262 Malpighiales View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain