Gene : Lus10032123.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11538:SF40 - PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT Genomic Order:  213
Name:  ? Lus10032123.g Secondary Identifier:  ? PAC:23161179
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10032123.g 0.5kb upstream 0.5kb upstream 5577 true scaffold42: 989861-995437 Linum usitatissimum
Lus10032123.g 0.5kb upstream 0.5kb upstream 500 false scaffold42: 989861-990360 Linum usitatissimum
Lus10032123.g 0.5kb downstream 0.5kb downstream 5577 true scaffold42: 990361-995937 Linum usitatissimum
Lus10032123.g 0.5kb downstream 0.5kb downstream 500 false scaffold42: 995438-995937 Linum usitatissimum
Lus10032123.g 1.0kb upstream 1.0kb upstream 6077 true scaffold42: 989361-995437 Linum usitatissimum
Lus10032123.g 1.0kb upstream 1.0kb upstream 1000 false scaffold42: 989361-990360 Linum usitatissimum
Lus10032123.g 1.0kb downstream 1.0kb downstream 6077 true scaffold42: 990361-996437 Linum usitatissimum
Lus10032123.g 1.0kb downstream 1.0kb downstream 1000 false scaffold42: 995438-996437 Linum usitatissimum
Lus10032123.g 2.0kb upstream 2.0kb upstream 7077 true scaffold42: 988361-995437 Linum usitatissimum
Lus10032123.g 2.0kb upstream 2.0kb upstream 2000 false scaffold42: 988361-990360 Linum usitatissimum
Lus10032123.g 2.0kb downstream 2.0kb downstream 7077 true scaffold42: 990361-997437 Linum usitatissimum
Lus10032123.g 2.0kb downstream 2.0kb downstream 2000 false scaffold42: 995438-997437 Linum usitatissimum
Lus10032123.g 5.0kb upstream 5.0kb upstream 10077 true scaffold42: 985361-995437 Linum usitatissimum
Lus10032123.g 5.0kb upstream 5.0kb upstream 5000 false scaffold42: 985361-990360 Linum usitatissimum
Lus10032123.g 5.0kb downstream 5.0kb downstream 10077 true scaffold42: 990361-1000437 Linum usitatissimum
Lus10032123.g 5.0kb downstream 5.0kb downstream 5000 false scaffold42: 995438-1000437 Linum usitatissimum
Lus10032123.g 10.0kb upstream 10.0kb upstream 15077 true scaffold42: 980361-995437 Linum usitatissimum
Lus10032123.g 10.0kb upstream 10.0kb upstream 10000 false scaffold42: 980361-990360 Linum usitatissimum
Lus10032123.g 10.0kb downstream 10.0kb downstream 15077 true scaffold42: 990361-1005437 Linum usitatissimum
Lus10032123.g 10.0kb downstream 10.0kb downstream 10000 false scaffold42: 995438-1005437 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040985 5273 Angiosperm View MSA
122384831 5262 Malpighiales View MSA
124242019 5268 Malvidae View MSA
124067851 5270 Rosid View MSA
123744864 5271 Pentapetalae View MSA
122791100 5272 Eudicot View MSA
121346168 5274 Embryophyte View MSA
123424573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain