Gene : Lus10019711.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR31375:SF28 - POLYGALACTURONASE QRT2 Genomic Order:  79
Name:  ? Lus10019711.g Secondary Identifier:  ? PAC:23139186
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1081 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10019711.g 0.5kb upstream 0.5kb upstream 3339 true scaffold420: 459447-462785 Linum usitatissimum
Lus10019711.g 0.5kb upstream 0.5kb upstream 500 false scaffold420: 459447-459946 Linum usitatissimum
Lus10019711.g 0.5kb downstream 0.5kb downstream 3339 true scaffold420: 459947-463285 Linum usitatissimum
Lus10019711.g 0.5kb downstream 0.5kb downstream 500 false scaffold420: 462786-463285 Linum usitatissimum
Lus10019711.g 1.0kb upstream 1.0kb upstream 3839 true scaffold420: 458947-462785 Linum usitatissimum
Lus10019711.g 1.0kb upstream 1.0kb upstream 1000 false scaffold420: 458947-459946 Linum usitatissimum
Lus10019711.g 1.0kb downstream 1.0kb downstream 3839 true scaffold420: 459947-463785 Linum usitatissimum
Lus10019711.g 1.0kb downstream 1.0kb downstream 1000 false scaffold420: 462786-463785 Linum usitatissimum
Lus10019711.g 2.0kb upstream 2.0kb upstream 4839 true scaffold420: 457947-462785 Linum usitatissimum
Lus10019711.g 2.0kb upstream 2.0kb upstream 2000 false scaffold420: 457947-459946 Linum usitatissimum
Lus10019711.g 2.0kb downstream 2.0kb downstream 4839 true scaffold420: 459947-464785 Linum usitatissimum
Lus10019711.g 2.0kb downstream 2.0kb downstream 2000 false scaffold420: 462786-464785 Linum usitatissimum
Lus10019711.g 5.0kb upstream 5.0kb upstream 7839 true scaffold420: 454947-462785 Linum usitatissimum
Lus10019711.g 5.0kb upstream 5.0kb upstream 5000 false scaffold420: 454947-459946 Linum usitatissimum
Lus10019711.g 5.0kb downstream 5.0kb downstream 7839 true scaffold420: 459947-467785 Linum usitatissimum
Lus10019711.g 5.0kb downstream 5.0kb downstream 5000 false scaffold420: 462786-467785 Linum usitatissimum
Lus10019711.g 10.0kb upstream 10.0kb upstream 12839 true scaffold420: 449947-462785 Linum usitatissimum
Lus10019711.g 10.0kb upstream 10.0kb upstream 10000 false scaffold420: 449947-459946 Linum usitatissimum
Lus10019711.g 10.0kb downstream 10.0kb downstream 12839 true scaffold420: 459947-472785 Linum usitatissimum
Lus10019711.g 10.0kb downstream 10.0kb downstream 10000 false scaffold420: 462786-472785 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122420712 5262 Malpighiales Singleton cluster - no MSA
124213017 5268 Malvidae Singleton cluster - no MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain