Gene : Lus10002160.g L. usitatissimum v1.0

Defline:  (1 of 164) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  5
Name:  ? Lus10002160.g Secondary Identifier:  ? PAC:23154563

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10002160.g 0.5kb upstream 0.5kb upstream 1488 true scaffold428: 55036-56523 Linum usitatissimum
Lus10002160.g 0.5kb upstream 0.5kb upstream 500 false scaffold428: 56024-56523 Linum usitatissimum
Lus10002160.g 0.5kb downstream 0.5kb downstream 1488 true scaffold428: 54536-56023 Linum usitatissimum
Lus10002160.g 0.5kb downstream 0.5kb downstream 500 false scaffold428: 54536-55035 Linum usitatissimum
Lus10002160.g 1.0kb upstream 1.0kb upstream 1988 true scaffold428: 55036-57023 Linum usitatissimum
Lus10002160.g 1.0kb upstream 1.0kb upstream 1000 false scaffold428: 56024-57023 Linum usitatissimum
Lus10002160.g 1.0kb downstream 1.0kb downstream 1988 true scaffold428: 54036-56023 Linum usitatissimum
Lus10002160.g 1.0kb downstream 1.0kb downstream 1000 false scaffold428: 54036-55035 Linum usitatissimum
Lus10002160.g 2.0kb upstream 2.0kb upstream 2988 true scaffold428: 55036-58023 Linum usitatissimum
Lus10002160.g 2.0kb upstream 2.0kb upstream 2000 false scaffold428: 56024-58023 Linum usitatissimum
Lus10002160.g 2.0kb downstream 2.0kb downstream 2988 true scaffold428: 53036-56023 Linum usitatissimum
Lus10002160.g 2.0kb downstream 2.0kb downstream 2000 false scaffold428: 53036-55035 Linum usitatissimum
Lus10002160.g 5.0kb upstream 5.0kb upstream 5988 true scaffold428: 55036-61023 Linum usitatissimum
Lus10002160.g 5.0kb upstream 5.0kb upstream 5000 false scaffold428: 56024-61023 Linum usitatissimum
Lus10002160.g 5.0kb downstream 5.0kb downstream 5988 true scaffold428: 50036-56023 Linum usitatissimum
Lus10002160.g 5.0kb downstream 5.0kb downstream 5000 false scaffold428: 50036-55035 Linum usitatissimum
Lus10002160.g 10.0kb upstream 10.0kb upstream 10988 true scaffold428: 55036-66023 Linum usitatissimum
Lus10002160.g 10.0kb upstream 10.0kb upstream 10000 false scaffold428: 56024-66023 Linum usitatissimum
Lus10002160.g 10.0kb downstream 10.0kb downstream 10988 true scaffold428: 45036-56023 Linum usitatissimum
Lus10002160.g 10.0kb downstream 10.0kb downstream 10000 false scaffold428: 45036-55035 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462716 5262 Malpighiales View MSA
124253224 5268 Malvidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain