Gene : Lus10020229.g L. usitatissimum v1.0
Defline:  (1 of 4) PTHR11685:SF135 - E3 UBIQUITIN-PROTEIN LIGASE ARI10-RELATED Genomic Order:  138
Name:  ? Lus10020229.g Secondary Identifier:  ? PAC:23141999
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10020229.g 0.5kb upstream 0.5kb upstream 7824 true scaffold454: 726607-734430 Linum usitatissimum
Lus10020229.g 0.5kb upstream 0.5kb upstream 500 false scaffold454: 733931-734430 Linum usitatissimum
Lus10020229.g 0.5kb downstream 0.5kb downstream 7824 true scaffold454: 726107-733930 Linum usitatissimum
Lus10020229.g 0.5kb downstream 0.5kb downstream 500 false scaffold454: 726107-726606 Linum usitatissimum
Lus10020229.g 1.0kb upstream 1.0kb upstream 8324 true scaffold454: 726607-734930 Linum usitatissimum
Lus10020229.g 1.0kb upstream 1.0kb upstream 1000 false scaffold454: 733931-734930 Linum usitatissimum
Lus10020229.g 1.0kb downstream 1.0kb downstream 8324 true scaffold454: 725607-733930 Linum usitatissimum
Lus10020229.g 1.0kb downstream 1.0kb downstream 1000 false scaffold454: 725607-726606 Linum usitatissimum
Lus10020229.g 2.0kb upstream 2.0kb upstream 9324 true scaffold454: 726607-735930 Linum usitatissimum
Lus10020229.g 2.0kb upstream 2.0kb upstream 2000 false scaffold454: 733931-735930 Linum usitatissimum
Lus10020229.g 2.0kb downstream 2.0kb downstream 9324 true scaffold454: 724607-733930 Linum usitatissimum
Lus10020229.g 2.0kb downstream 2.0kb downstream 2000 false scaffold454: 724607-726606 Linum usitatissimum
Lus10020229.g 5.0kb upstream 5.0kb upstream 12324 true scaffold454: 726607-738930 Linum usitatissimum
Lus10020229.g 5.0kb upstream 5.0kb upstream 5000 false scaffold454: 733931-738930 Linum usitatissimum
Lus10020229.g 5.0kb downstream 5.0kb downstream 12324 true scaffold454: 721607-733930 Linum usitatissimum
Lus10020229.g 5.0kb downstream 5.0kb downstream 5000 false scaffold454: 721607-726606 Linum usitatissimum
Lus10020229.g 10.0kb upstream 10.0kb upstream 17324 true scaffold454: 726607-743930 Linum usitatissimum
Lus10020229.g 10.0kb upstream 10.0kb upstream 10000 false scaffold454: 733931-743930 Linum usitatissimum
Lus10020229.g 10.0kb downstream 10.0kb downstream 17324 true scaffold454: 716607-733930 Linum usitatissimum
Lus10020229.g 10.0kb downstream 10.0kb downstream 10000 false scaffold454: 716607-726606 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122420984 5262 Malpighiales Singleton cluster - no MSA
124248365 5268 Malvidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain