Gene : Lus10035589.g L. usitatissimum v1.0
Defline:  (1 of 14) PTHR11254 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Genomic Order:  91
Name:  ? Lus10035589.g Secondary Identifier:  ? PAC:23147544
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10035589.g 0.5kb upstream 0.5kb upstream 6437 true scaffold464: 482986-489422 Linum usitatissimum
Lus10035589.g 0.5kb upstream 0.5kb upstream 500 false scaffold464: 482986-483485 Linum usitatissimum
Lus10035589.g 0.5kb downstream 0.5kb downstream 6437 true scaffold464: 483486-489922 Linum usitatissimum
Lus10035589.g 0.5kb downstream 0.5kb downstream 500 false scaffold464: 489423-489922 Linum usitatissimum
Lus10035589.g 1.0kb upstream 1.0kb upstream 6937 true scaffold464: 482486-489422 Linum usitatissimum
Lus10035589.g 1.0kb upstream 1.0kb upstream 1000 false scaffold464: 482486-483485 Linum usitatissimum
Lus10035589.g 1.0kb downstream 1.0kb downstream 6937 true scaffold464: 483486-490422 Linum usitatissimum
Lus10035589.g 1.0kb downstream 1.0kb downstream 1000 false scaffold464: 489423-490422 Linum usitatissimum
Lus10035589.g 2.0kb upstream 2.0kb upstream 7937 true scaffold464: 481486-489422 Linum usitatissimum
Lus10035589.g 2.0kb upstream 2.0kb upstream 2000 false scaffold464: 481486-483485 Linum usitatissimum
Lus10035589.g 2.0kb downstream 2.0kb downstream 7937 true scaffold464: 483486-491422 Linum usitatissimum
Lus10035589.g 2.0kb downstream 2.0kb downstream 2000 false scaffold464: 489423-491422 Linum usitatissimum
Lus10035589.g 5.0kb upstream 5.0kb upstream 10937 true scaffold464: 478486-489422 Linum usitatissimum
Lus10035589.g 5.0kb upstream 5.0kb upstream 5000 false scaffold464: 478486-483485 Linum usitatissimum
Lus10035589.g 5.0kb downstream 5.0kb downstream 10937 true scaffold464: 483486-494422 Linum usitatissimum
Lus10035589.g 5.0kb downstream 5.0kb downstream 5000 false scaffold464: 489423-494422 Linum usitatissimum
Lus10035589.g 10.0kb upstream 10.0kb upstream 15937 true scaffold464: 473486-489422 Linum usitatissimum
Lus10035589.g 10.0kb upstream 10.0kb upstream 10000 false scaffold464: 473486-483485 Linum usitatissimum
Lus10035589.g 10.0kb downstream 10.0kb downstream 15937 true scaffold464: 483486-499422 Linum usitatissimum
Lus10035589.g 10.0kb downstream 10.0kb downstream 10000 false scaffold464: 489423-499422 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456079 5262 Malpighiales View MSA
124252639 5268 Malvidae View MSA
124065760 5270 Rosid View MSA
123737097 5271 Pentapetalae View MSA
122793139 5272 Eudicot View MSA
122047566 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121351552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain