Gene : Lus10022524.g L. usitatissimum v1.0
Defline:  (1 of 15) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  15
Name:  ? Lus10022524.g Secondary Identifier:  ? PAC:23166922
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10022524.g 0.5kb upstream 0.5kb upstream 2052 true scaffold465: 243795-245846 Linum usitatissimum
Lus10022524.g 0.5kb upstream 0.5kb upstream 500 false scaffold465: 243795-244294 Linum usitatissimum
Lus10022524.g 0.5kb downstream 0.5kb downstream 2052 true scaffold465: 244295-246346 Linum usitatissimum
Lus10022524.g 0.5kb downstream 0.5kb downstream 500 false scaffold465: 245847-246346 Linum usitatissimum
Lus10022524.g 1.0kb upstream 1.0kb upstream 2552 true scaffold465: 243295-245846 Linum usitatissimum
Lus10022524.g 1.0kb upstream 1.0kb upstream 1000 false scaffold465: 243295-244294 Linum usitatissimum
Lus10022524.g 1.0kb downstream 1.0kb downstream 2552 true scaffold465: 244295-246846 Linum usitatissimum
Lus10022524.g 1.0kb downstream 1.0kb downstream 1000 false scaffold465: 245847-246846 Linum usitatissimum
Lus10022524.g 2.0kb upstream 2.0kb upstream 3552 true scaffold465: 242295-245846 Linum usitatissimum
Lus10022524.g 2.0kb upstream 2.0kb upstream 2000 false scaffold465: 242295-244294 Linum usitatissimum
Lus10022524.g 2.0kb downstream 2.0kb downstream 3552 true scaffold465: 244295-247846 Linum usitatissimum
Lus10022524.g 2.0kb downstream 2.0kb downstream 2000 false scaffold465: 245847-247846 Linum usitatissimum
Lus10022524.g 5.0kb upstream 5.0kb upstream 6552 true scaffold465: 239295-245846 Linum usitatissimum
Lus10022524.g 5.0kb upstream 5.0kb upstream 5000 false scaffold465: 239295-244294 Linum usitatissimum
Lus10022524.g 5.0kb downstream 5.0kb downstream 6552 true scaffold465: 244295-250846 Linum usitatissimum
Lus10022524.g 5.0kb downstream 5.0kb downstream 5000 false scaffold465: 245847-250846 Linum usitatissimum
Lus10022524.g 10.0kb upstream 10.0kb upstream 11552 true scaffold465: 234295-245846 Linum usitatissimum
Lus10022524.g 10.0kb upstream 10.0kb upstream 10000 false scaffold465: 234295-244294 Linum usitatissimum
Lus10022524.g 10.0kb downstream 10.0kb downstream 11552 true scaffold465: 244295-255846 Linum usitatissimum
Lus10022524.g 10.0kb downstream 10.0kb downstream 10000 false scaffold465: 245847-255846 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426544 5262 Malpighiales View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain