Gene : Lus10027165.g L. usitatissimum v1.0
Defline:  (1 of 8) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  23
Name:  ? Lus10027165.g Secondary Identifier:  ? PAC:23145551
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLYOXYLATE-BYPASS Linum usitatissimum pathologic  
Lusitatissimum PWY-5464 Linum usitatissimum pathologic  
Lusitatissimum PWY-561 Linum usitatissimum pathologic  
Lusitatissimum PWY-5690 Linum usitatissimum pathologic  
Lusitatissimum PWY-6549 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10027165.g 0.5kb upstream 0.5kb upstream 6120 true scaffold472: 80900-87019 Linum usitatissimum
Lus10027165.g 0.5kb upstream 0.5kb upstream 500 false scaffold472: 80900-81399 Linum usitatissimum
Lus10027165.g 0.5kb downstream 0.5kb downstream 6120 true scaffold472: 81400-87519 Linum usitatissimum
Lus10027165.g 0.5kb downstream 0.5kb downstream 500 false scaffold472: 87020-87519 Linum usitatissimum
Lus10027165.g 1.0kb upstream 1.0kb upstream 6620 true scaffold472: 80400-87019 Linum usitatissimum
Lus10027165.g 1.0kb upstream 1.0kb upstream 1000 false scaffold472: 80400-81399 Linum usitatissimum
Lus10027165.g 1.0kb downstream 1.0kb downstream 6620 true scaffold472: 81400-88019 Linum usitatissimum
Lus10027165.g 1.0kb downstream 1.0kb downstream 1000 false scaffold472: 87020-88019 Linum usitatissimum
Lus10027165.g 2.0kb upstream 2.0kb upstream 7620 true scaffold472: 79400-87019 Linum usitatissimum
Lus10027165.g 2.0kb upstream 2.0kb upstream 2000 false scaffold472: 79400-81399 Linum usitatissimum
Lus10027165.g 2.0kb downstream 2.0kb downstream 7620 true scaffold472: 81400-89019 Linum usitatissimum
Lus10027165.g 2.0kb downstream 2.0kb downstream 2000 false scaffold472: 87020-89019 Linum usitatissimum
Lus10027165.g 5.0kb upstream 5.0kb upstream 10620 true scaffold472: 76400-87019 Linum usitatissimum
Lus10027165.g 5.0kb upstream 5.0kb upstream 5000 false scaffold472: 76400-81399 Linum usitatissimum
Lus10027165.g 5.0kb downstream 5.0kb downstream 10620 true scaffold472: 81400-92019 Linum usitatissimum
Lus10027165.g 5.0kb downstream 5.0kb downstream 5000 false scaffold472: 87020-92019 Linum usitatissimum
Lus10027165.g 10.0kb upstream 10.0kb upstream 15620 true scaffold472: 71400-87019 Linum usitatissimum
Lus10027165.g 10.0kb upstream 10.0kb upstream 10000 false scaffold472: 71400-81399 Linum usitatissimum
Lus10027165.g 10.0kb downstream 10.0kb downstream 15620 true scaffold472: 81400-97019 Linum usitatissimum
Lus10027165.g 10.0kb downstream 10.0kb downstream 10000 false scaffold472: 87020-97019 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460700 5262 Malpighiales View MSA
124253803 5268 Malvidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain