Gene : Lus10038059.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  224
Name:  ? Lus10038059.g Secondary Identifier:  ? PAC:23163868
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1081 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10038059.g 0.5kb upstream 0.5kb upstream 2538 true scaffold475: 1091621-1094158 Linum usitatissimum
Lus10038059.g 0.5kb upstream 0.5kb upstream 500 false scaffold475: 1091621-1092120 Linum usitatissimum
Lus10038059.g 0.5kb downstream 0.5kb downstream 2538 true scaffold475: 1092121-1094658 Linum usitatissimum
Lus10038059.g 0.5kb downstream 0.5kb downstream 500 false scaffold475: 1094159-1094658 Linum usitatissimum
Lus10038059.g 1.0kb upstream 1.0kb upstream 3038 true scaffold475: 1091121-1094158 Linum usitatissimum
Lus10038059.g 1.0kb upstream 1.0kb upstream 1000 false scaffold475: 1091121-1092120 Linum usitatissimum
Lus10038059.g 1.0kb downstream 1.0kb downstream 3038 true scaffold475: 1092121-1095158 Linum usitatissimum
Lus10038059.g 1.0kb downstream 1.0kb downstream 1000 false scaffold475: 1094159-1095158 Linum usitatissimum
Lus10038059.g 2.0kb upstream 2.0kb upstream 4038 true scaffold475: 1090121-1094158 Linum usitatissimum
Lus10038059.g 2.0kb upstream 2.0kb upstream 2000 false scaffold475: 1090121-1092120 Linum usitatissimum
Lus10038059.g 2.0kb downstream 2.0kb downstream 4038 true scaffold475: 1092121-1096158 Linum usitatissimum
Lus10038059.g 2.0kb downstream 2.0kb downstream 2000 false scaffold475: 1094159-1096158 Linum usitatissimum
Lus10038059.g 5.0kb upstream 5.0kb upstream 7038 true scaffold475: 1087121-1094158 Linum usitatissimum
Lus10038059.g 5.0kb upstream 5.0kb upstream 5000 false scaffold475: 1087121-1092120 Linum usitatissimum
Lus10038059.g 5.0kb downstream 5.0kb downstream 7038 true scaffold475: 1092121-1099158 Linum usitatissimum
Lus10038059.g 5.0kb downstream 5.0kb downstream 5000 false scaffold475: 1094159-1099158 Linum usitatissimum
Lus10038059.g 10.0kb upstream 10.0kb upstream 12038 true scaffold475: 1082121-1094158 Linum usitatissimum
Lus10038059.g 10.0kb upstream 10.0kb upstream 10000 false scaffold475: 1082121-1092120 Linum usitatissimum
Lus10038059.g 10.0kb downstream 10.0kb downstream 12038 true scaffold475: 1092121-1104158 Linum usitatissimum
Lus10038059.g 10.0kb downstream 10.0kb downstream 10000 false scaffold475: 1094159-1104158 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450307 5262 Malpighiales View MSA
124249445 5268 Malvidae View MSA
124066514 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain