Gene : Lus10005169.g L. usitatissimum v1.0
Defline:  (1 of 1) PF02130//PF08282 - Uncharacterized protein family UPF0054 (UPF0054) // haloacid dehalogenase-like hydrolase (Hydrolase_3) Genomic Order:  2
Name:  ? Lus10005169.g Secondary Identifier:  ? PAC:23163363
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLUCOSE1PMETAB-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-3881 Linum usitatissimum pathologic  
Lusitatissimum PWY66-399 Linum usitatissimum pathologic  
Lusitatissimum PWY-882 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10005169.g 0.5kb upstream 0.5kb upstream 4023 true scaffold485: 41619-45641 Linum usitatissimum
Lus10005169.g 0.5kb upstream 0.5kb upstream 500 false scaffold485: 41619-42118 Linum usitatissimum
Lus10005169.g 0.5kb downstream 0.5kb downstream 4023 true scaffold485: 42119-46141 Linum usitatissimum
Lus10005169.g 0.5kb downstream 0.5kb downstream 500 false scaffold485: 45642-46141 Linum usitatissimum
Lus10005169.g 1.0kb upstream 1.0kb upstream 4523 true scaffold485: 41119-45641 Linum usitatissimum
Lus10005169.g 1.0kb upstream 1.0kb upstream 1000 false scaffold485: 41119-42118 Linum usitatissimum
Lus10005169.g 1.0kb downstream 1.0kb downstream 4523 true scaffold485: 42119-46641 Linum usitatissimum
Lus10005169.g 1.0kb downstream 1.0kb downstream 1000 false scaffold485: 45642-46641 Linum usitatissimum
Lus10005169.g 2.0kb upstream 2.0kb upstream 5523 true scaffold485: 40119-45641 Linum usitatissimum
Lus10005169.g 2.0kb upstream 2.0kb upstream 2000 false scaffold485: 40119-42118 Linum usitatissimum
Lus10005169.g 2.0kb downstream 2.0kb downstream 5523 true scaffold485: 42119-47641 Linum usitatissimum
Lus10005169.g 2.0kb downstream 2.0kb downstream 2000 false scaffold485: 45642-47641 Linum usitatissimum
Lus10005169.g 5.0kb upstream 5.0kb upstream 8523 true scaffold485: 37119-45641 Linum usitatissimum
Lus10005169.g 5.0kb upstream 5.0kb upstream 5000 false scaffold485: 37119-42118 Linum usitatissimum
Lus10005169.g 5.0kb downstream 5.0kb downstream 8523 true scaffold485: 42119-50641 Linum usitatissimum
Lus10005169.g 5.0kb downstream 5.0kb downstream 5000 false scaffold485: 45642-50641 Linum usitatissimum
Lus10005169.g 10.0kb upstream 10.0kb upstream 13523 true scaffold485: 32119-45641 Linum usitatissimum
Lus10005169.g 10.0kb upstream 10.0kb upstream 10000 false scaffold485: 32119-42118 Linum usitatissimum
Lus10005169.g 10.0kb downstream 10.0kb downstream 13523 true scaffold485: 42119-55641 Linum usitatissimum
Lus10005169.g 10.0kb downstream 10.0kb downstream 10000 false scaffold485: 45642-55641 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452935 5262 Malpighiales View MSA
124242527 5268 Malvidae View MSA
124062911 5270 Rosid View MSA
123738949 5271 Pentapetalae View MSA
122790321 5272 Eudicot View MSA
122046350 5273 Angiosperm View MSA
121345493 5274 Embryophyte View MSA
123427682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain