Gene : Lus10023673.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR10543:SF48 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED6, CHLOROPLASTIC Genomic Order:  87
Name:  ? Lus10023673.g Secondary Identifier:  ? PAC:23148347
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-695 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10023673.g 0.5kb upstream 0.5kb upstream 2294 true scaffold505: 475067-477360 Linum usitatissimum
Lus10023673.g 0.5kb upstream 0.5kb upstream 500 false scaffold505: 475067-475566 Linum usitatissimum
Lus10023673.g 0.5kb downstream 0.5kb downstream 2294 true scaffold505: 475567-477860 Linum usitatissimum
Lus10023673.g 0.5kb downstream 0.5kb downstream 500 false scaffold505: 477361-477860 Linum usitatissimum
Lus10023673.g 1.0kb upstream 1.0kb upstream 2794 true scaffold505: 474567-477360 Linum usitatissimum
Lus10023673.g 1.0kb upstream 1.0kb upstream 1000 false scaffold505: 474567-475566 Linum usitatissimum
Lus10023673.g 1.0kb downstream 1.0kb downstream 2794 true scaffold505: 475567-478360 Linum usitatissimum
Lus10023673.g 1.0kb downstream 1.0kb downstream 1000 false scaffold505: 477361-478360 Linum usitatissimum
Lus10023673.g 2.0kb upstream 2.0kb upstream 3794 true scaffold505: 473567-477360 Linum usitatissimum
Lus10023673.g 2.0kb upstream 2.0kb upstream 2000 false scaffold505: 473567-475566 Linum usitatissimum
Lus10023673.g 2.0kb downstream 2.0kb downstream 3794 true scaffold505: 475567-479360 Linum usitatissimum
Lus10023673.g 2.0kb downstream 2.0kb downstream 2000 false scaffold505: 477361-479360 Linum usitatissimum
Lus10023673.g 5.0kb upstream 5.0kb upstream 6794 true scaffold505: 470567-477360 Linum usitatissimum
Lus10023673.g 5.0kb upstream 5.0kb upstream 5000 false scaffold505: 470567-475566 Linum usitatissimum
Lus10023673.g 5.0kb downstream 5.0kb downstream 6794 true scaffold505: 475567-482360 Linum usitatissimum
Lus10023673.g 5.0kb downstream 5.0kb downstream 5000 false scaffold505: 477361-482360 Linum usitatissimum
Lus10023673.g 10.0kb upstream 10.0kb upstream 11794 true scaffold505: 465567-477360 Linum usitatissimum
Lus10023673.g 10.0kb upstream 10.0kb upstream 10000 false scaffold505: 465567-475566 Linum usitatissimum
Lus10023673.g 10.0kb downstream 10.0kb downstream 11794 true scaffold505: 475567-487360 Linum usitatissimum
Lus10023673.g 10.0kb downstream 10.0kb downstream 10000 false scaffold505: 477361-487360 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452979 5262 Malpighiales View MSA
124242947 5268 Malvidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain