Gene : Lus10008084.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11624:SF64 - 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEIN Genomic Order:  7
Name:  ? Lus10008084.g Secondary Identifier:  ? PAC:23169787
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7560 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10008084.g 0.5kb upstream 0.5kb upstream 3961 true scaffold524: 38012-41972 Linum usitatissimum
Lus10008084.g 0.5kb upstream 0.5kb upstream 500 false scaffold524: 41473-41972 Linum usitatissimum
Lus10008084.g 0.5kb downstream 0.5kb downstream 3961 true scaffold524: 37512-41472 Linum usitatissimum
Lus10008084.g 0.5kb downstream 0.5kb downstream 500 false scaffold524: 37512-38011 Linum usitatissimum
Lus10008084.g 1.0kb upstream 1.0kb upstream 4461 true scaffold524: 38012-42472 Linum usitatissimum
Lus10008084.g 1.0kb upstream 1.0kb upstream 1000 false scaffold524: 41473-42472 Linum usitatissimum
Lus10008084.g 1.0kb downstream 1.0kb downstream 4461 true scaffold524: 37012-41472 Linum usitatissimum
Lus10008084.g 1.0kb downstream 1.0kb downstream 1000 false scaffold524: 37012-38011 Linum usitatissimum
Lus10008084.g 2.0kb upstream 2.0kb upstream 5461 true scaffold524: 38012-43472 Linum usitatissimum
Lus10008084.g 2.0kb upstream 2.0kb upstream 2000 false scaffold524: 41473-43472 Linum usitatissimum
Lus10008084.g 2.0kb downstream 2.0kb downstream 5461 true scaffold524: 36012-41472 Linum usitatissimum
Lus10008084.g 2.0kb downstream 2.0kb downstream 2000 false scaffold524: 36012-38011 Linum usitatissimum
Lus10008084.g 5.0kb upstream 5.0kb upstream 8461 true scaffold524: 38012-46472 Linum usitatissimum
Lus10008084.g 5.0kb upstream 5.0kb upstream 5000 false scaffold524: 41473-46472 Linum usitatissimum
Lus10008084.g 5.0kb downstream 5.0kb downstream 8461 true scaffold524: 33012-41472 Linum usitatissimum
Lus10008084.g 5.0kb downstream 5.0kb downstream 5000 false scaffold524: 33012-38011 Linum usitatissimum
Lus10008084.g 10.0kb upstream 10.0kb upstream 13461 true scaffold524: 38012-51472 Linum usitatissimum
Lus10008084.g 10.0kb upstream 10.0kb upstream 10000 false scaffold524: 41473-51472 Linum usitatissimum
Lus10008084.g 10.0kb downstream 10.0kb downstream 13461 true scaffold524: 28012-41472 Linum usitatissimum
Lus10008084.g 10.0kb downstream 10.0kb downstream 10000 false scaffold524: 28012-38011 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451696 5262 Malpighiales View MSA
124239225 5268 Malvidae View MSA
124066019 5270 Rosid View MSA
123737503 5271 Pentapetalae View MSA
122791788 5272 Eudicot View MSA
122044949 5273 Angiosperm View MSA
121310367 5274 Embryophyte View MSA
123347869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain