Gene : Lus10036477.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11778:SF0 - SERINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  150
Name:  ? Lus10036477.g Secondary Identifier:  ? PAC:23174375
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10036477.g 0.5kb upstream 0.5kb upstream 2903 true scaffold57: 803300-806202 Linum usitatissimum
Lus10036477.g 0.5kb upstream 0.5kb upstream 500 false scaffold57: 805703-806202 Linum usitatissimum
Lus10036477.g 0.5kb downstream 0.5kb downstream 2903 true scaffold57: 802800-805702 Linum usitatissimum
Lus10036477.g 0.5kb downstream 0.5kb downstream 500 false scaffold57: 802800-803299 Linum usitatissimum
Lus10036477.g 1.0kb upstream 1.0kb upstream 3403 true scaffold57: 803300-806702 Linum usitatissimum
Lus10036477.g 1.0kb upstream 1.0kb upstream 1000 false scaffold57: 805703-806702 Linum usitatissimum
Lus10036477.g 1.0kb downstream 1.0kb downstream 3403 true scaffold57: 802300-805702 Linum usitatissimum
Lus10036477.g 1.0kb downstream 1.0kb downstream 1000 false scaffold57: 802300-803299 Linum usitatissimum
Lus10036477.g 2.0kb upstream 2.0kb upstream 4403 true scaffold57: 803300-807702 Linum usitatissimum
Lus10036477.g 2.0kb upstream 2.0kb upstream 2000 false scaffold57: 805703-807702 Linum usitatissimum
Lus10036477.g 2.0kb downstream 2.0kb downstream 4403 true scaffold57: 801300-805702 Linum usitatissimum
Lus10036477.g 2.0kb downstream 2.0kb downstream 2000 false scaffold57: 801300-803299 Linum usitatissimum
Lus10036477.g 5.0kb upstream 5.0kb upstream 7403 true scaffold57: 803300-810702 Linum usitatissimum
Lus10036477.g 5.0kb upstream 5.0kb upstream 5000 false scaffold57: 805703-810702 Linum usitatissimum
Lus10036477.g 5.0kb downstream 5.0kb downstream 7403 true scaffold57: 798300-805702 Linum usitatissimum
Lus10036477.g 5.0kb downstream 5.0kb downstream 5000 false scaffold57: 798300-803299 Linum usitatissimum
Lus10036477.g 10.0kb upstream 10.0kb upstream 12403 true scaffold57: 803300-815702 Linum usitatissimum
Lus10036477.g 10.0kb upstream 10.0kb upstream 10000 false scaffold57: 805703-815702 Linum usitatissimum
Lus10036477.g 10.0kb downstream 10.0kb downstream 12403 true scaffold57: 793300-805702 Linum usitatissimum
Lus10036477.g 10.0kb downstream 10.0kb downstream 10000 false scaffold57: 793300-803299 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453046 5262 Malpighiales View MSA
124238864 5268 Malvidae View MSA
124074907 5270 Rosid View MSA
123738384 5271 Pentapetalae View MSA
122793450 5272 Eudicot View MSA
122045874 5273 Angiosperm View MSA
121344249 5274 Embryophyte View MSA
123424928 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain