Gene : Lus10010179.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Genomic Order:  36
Name:  ? Lus10010179.g Secondary Identifier:  ? PAC:23154199
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10010179.g 0.5kb upstream 0.5kb upstream 1283 true scaffold587: 163390-164672 Linum usitatissimum
Lus10010179.g 0.5kb upstream 0.5kb upstream 500 false scaffold587: 164173-164672 Linum usitatissimum
Lus10010179.g 0.5kb downstream 0.5kb downstream 1283 true scaffold587: 162890-164172 Linum usitatissimum
Lus10010179.g 0.5kb downstream 0.5kb downstream 500 false scaffold587: 162890-163389 Linum usitatissimum
Lus10010179.g 1.0kb upstream 1.0kb upstream 1783 true scaffold587: 163390-165172 Linum usitatissimum
Lus10010179.g 1.0kb upstream 1.0kb upstream 1000 false scaffold587: 164173-165172 Linum usitatissimum
Lus10010179.g 1.0kb downstream 1.0kb downstream 1783 true scaffold587: 162390-164172 Linum usitatissimum
Lus10010179.g 1.0kb downstream 1.0kb downstream 1000 false scaffold587: 162390-163389 Linum usitatissimum
Lus10010179.g 2.0kb upstream 2.0kb upstream 2783 true scaffold587: 163390-166172 Linum usitatissimum
Lus10010179.g 2.0kb upstream 2.0kb upstream 2000 false scaffold587: 164173-166172 Linum usitatissimum
Lus10010179.g 2.0kb downstream 2.0kb downstream 2783 true scaffold587: 161390-164172 Linum usitatissimum
Lus10010179.g 2.0kb downstream 2.0kb downstream 2000 false scaffold587: 161390-163389 Linum usitatissimum
Lus10010179.g 5.0kb upstream 5.0kb upstream 5783 true scaffold587: 163390-169172 Linum usitatissimum
Lus10010179.g 5.0kb upstream 5.0kb upstream 5000 false scaffold587: 164173-169172 Linum usitatissimum
Lus10010179.g 5.0kb downstream 5.0kb downstream 5783 true scaffold587: 158390-164172 Linum usitatissimum
Lus10010179.g 5.0kb downstream 5.0kb downstream 5000 false scaffold587: 158390-163389 Linum usitatissimum
Lus10010179.g 10.0kb upstream 10.0kb upstream 10783 true scaffold587: 163390-174172 Linum usitatissimum
Lus10010179.g 10.0kb upstream 10.0kb upstream 10000 false scaffold587: 164173-174172 Linum usitatissimum
Lus10010179.g 10.0kb downstream 10.0kb downstream 10783 true scaffold587: 153390-164172 Linum usitatissimum
Lus10010179.g 10.0kb downstream 10.0kb downstream 10000 false scaffold587: 153390-163389 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453250 5262 Malpighiales View MSA
124254333 5268 Malvidae View MSA
124062824 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain