Gene : Lus10009198.g L. usitatissimum v1.0
Defline:  (1 of 2) 4.2.1.109 - Methylthioribulose 1-phosphate dehydratase / 1-PMT-ribulose dehydratase Genomic Order:  5
Name:  ? Lus10009198.g Secondary Identifier:  ? PAC:23145592
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-4361 Linum usitatissimum pathologic  
Lusitatissimum PWY-7270 Linum usitatissimum pathologic  
Lusitatissimum PWY-7528 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10009198.g 0.5kb upstream 0.5kb upstream 5599 true scaffold60: 47554-53152 Linum usitatissimum
Lus10009198.g 0.5kb upstream 0.5kb upstream 500 false scaffold60: 47554-48053 Linum usitatissimum
Lus10009198.g 0.5kb downstream 0.5kb downstream 5599 true scaffold60: 48054-53652 Linum usitatissimum
Lus10009198.g 0.5kb downstream 0.5kb downstream 500 false scaffold60: 53153-53652 Linum usitatissimum
Lus10009198.g 1.0kb upstream 1.0kb upstream 6099 true scaffold60: 47054-53152 Linum usitatissimum
Lus10009198.g 1.0kb upstream 1.0kb upstream 1000 false scaffold60: 47054-48053 Linum usitatissimum
Lus10009198.g 1.0kb downstream 1.0kb downstream 6099 true scaffold60: 48054-54152 Linum usitatissimum
Lus10009198.g 1.0kb downstream 1.0kb downstream 1000 false scaffold60: 53153-54152 Linum usitatissimum
Lus10009198.g 2.0kb upstream 2.0kb upstream 7099 true scaffold60: 46054-53152 Linum usitatissimum
Lus10009198.g 2.0kb upstream 2.0kb upstream 2000 false scaffold60: 46054-48053 Linum usitatissimum
Lus10009198.g 2.0kb downstream 2.0kb downstream 7099 true scaffold60: 48054-55152 Linum usitatissimum
Lus10009198.g 2.0kb downstream 2.0kb downstream 2000 false scaffold60: 53153-55152 Linum usitatissimum
Lus10009198.g 5.0kb upstream 5.0kb upstream 10099 true scaffold60: 43054-53152 Linum usitatissimum
Lus10009198.g 5.0kb upstream 5.0kb upstream 5000 false scaffold60: 43054-48053 Linum usitatissimum
Lus10009198.g 5.0kb downstream 5.0kb downstream 10099 true scaffold60: 48054-58152 Linum usitatissimum
Lus10009198.g 5.0kb downstream 5.0kb downstream 5000 false scaffold60: 53153-58152 Linum usitatissimum
Lus10009198.g 10.0kb upstream 10.0kb upstream 15099 true scaffold60: 38054-53152 Linum usitatissimum
Lus10009198.g 10.0kb upstream 10.0kb upstream 10000 false scaffold60: 38054-48053 Linum usitatissimum
Lus10009198.g 10.0kb downstream 10.0kb downstream 15099 true scaffold60: 48054-63152 Linum usitatissimum
Lus10009198.g 10.0kb downstream 10.0kb downstream 10000 false scaffold60: 53153-63152 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454241 5262 Malpighiales View MSA
124251861 5268 Malvidae View MSA
124067379 5270 Rosid View MSA
123736573 5271 Pentapetalae View MSA
122786615 5272 Eudicot View MSA
122042020 5273 Angiosperm View MSA
121345843 5274 Embryophyte View MSA
123425019 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain