Gene : Lus10012797.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR21089//PTHR21089:SF12 - SHIKIMATE DEHYDROGENASE Genomic Order:  39
Name:  ? Lus10012797.g Secondary Identifier:  ? PAC:23142344
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum ARO-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-6163 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10012797.g 0.5kb upstream 0.5kb upstream 3669 true scaffold604: 292885-296553 Linum usitatissimum
Lus10012797.g 0.5kb upstream 0.5kb upstream 500 false scaffold604: 296054-296553 Linum usitatissimum
Lus10012797.g 0.5kb downstream 0.5kb downstream 3669 true scaffold604: 292385-296053 Linum usitatissimum
Lus10012797.g 0.5kb downstream 0.5kb downstream 500 false scaffold604: 292385-292884 Linum usitatissimum
Lus10012797.g 1.0kb upstream 1.0kb upstream 4169 true scaffold604: 292885-297053 Linum usitatissimum
Lus10012797.g 1.0kb upstream 1.0kb upstream 1000 false scaffold604: 296054-297053 Linum usitatissimum
Lus10012797.g 1.0kb downstream 1.0kb downstream 4169 true scaffold604: 291885-296053 Linum usitatissimum
Lus10012797.g 1.0kb downstream 1.0kb downstream 1000 false scaffold604: 291885-292884 Linum usitatissimum
Lus10012797.g 2.0kb upstream 2.0kb upstream 5169 true scaffold604: 292885-298053 Linum usitatissimum
Lus10012797.g 2.0kb upstream 2.0kb upstream 2000 false scaffold604: 296054-298053 Linum usitatissimum
Lus10012797.g 2.0kb downstream 2.0kb downstream 5169 true scaffold604: 290885-296053 Linum usitatissimum
Lus10012797.g 2.0kb downstream 2.0kb downstream 2000 false scaffold604: 290885-292884 Linum usitatissimum
Lus10012797.g 5.0kb upstream 5.0kb upstream 8169 true scaffold604: 292885-301053 Linum usitatissimum
Lus10012797.g 5.0kb upstream 5.0kb upstream 5000 false scaffold604: 296054-301053 Linum usitatissimum
Lus10012797.g 5.0kb downstream 5.0kb downstream 8169 true scaffold604: 287885-296053 Linum usitatissimum
Lus10012797.g 5.0kb downstream 5.0kb downstream 5000 false scaffold604: 287885-292884 Linum usitatissimum
Lus10012797.g 10.0kb upstream 10.0kb upstream 13169 true scaffold604: 292885-306053 Linum usitatissimum
Lus10012797.g 10.0kb upstream 10.0kb upstream 10000 false scaffold604: 296054-306053 Linum usitatissimum
Lus10012797.g 10.0kb downstream 10.0kb downstream 13169 true scaffold604: 282885-296053 Linum usitatissimum
Lus10012797.g 10.0kb downstream 10.0kb downstream 10000 false scaffold604: 282885-292884 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451145 5262 Malpighiales View MSA
124242776 5268 Malvidae View MSA
124068153 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain