Gene : Lus10012811.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  53
Name:  ? Lus10012811.g Secondary Identifier:  ? PAC:23142360
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10012811.g 0.5kb upstream 0.5kb upstream 3312 true scaffold604: 424621-427932 Linum usitatissimum
Lus10012811.g 0.5kb upstream 0.5kb upstream 500 false scaffold604: 427433-427932 Linum usitatissimum
Lus10012811.g 0.5kb downstream 0.5kb downstream 3312 true scaffold604: 424121-427432 Linum usitatissimum
Lus10012811.g 0.5kb downstream 0.5kb downstream 500 false scaffold604: 424121-424620 Linum usitatissimum
Lus10012811.g 1.0kb upstream 1.0kb upstream 3812 true scaffold604: 424621-428432 Linum usitatissimum
Lus10012811.g 1.0kb upstream 1.0kb upstream 1000 false scaffold604: 427433-428432 Linum usitatissimum
Lus10012811.g 1.0kb downstream 1.0kb downstream 3812 true scaffold604: 423621-427432 Linum usitatissimum
Lus10012811.g 1.0kb downstream 1.0kb downstream 1000 false scaffold604: 423621-424620 Linum usitatissimum
Lus10012811.g 2.0kb upstream 2.0kb upstream 4812 true scaffold604: 424621-429432 Linum usitatissimum
Lus10012811.g 2.0kb upstream 2.0kb upstream 2000 false scaffold604: 427433-429432 Linum usitatissimum
Lus10012811.g 2.0kb downstream 2.0kb downstream 4812 true scaffold604: 422621-427432 Linum usitatissimum
Lus10012811.g 2.0kb downstream 2.0kb downstream 2000 false scaffold604: 422621-424620 Linum usitatissimum
Lus10012811.g 5.0kb upstream 5.0kb upstream 7812 true scaffold604: 424621-432432 Linum usitatissimum
Lus10012811.g 5.0kb upstream 5.0kb upstream 5000 false scaffold604: 427433-432432 Linum usitatissimum
Lus10012811.g 5.0kb downstream 5.0kb downstream 7812 true scaffold604: 419621-427432 Linum usitatissimum
Lus10012811.g 5.0kb downstream 5.0kb downstream 5000 false scaffold604: 419621-424620 Linum usitatissimum
Lus10012811.g 10.0kb upstream 10.0kb upstream 12812 true scaffold604: 424621-437432 Linum usitatissimum
Lus10012811.g 10.0kb upstream 10.0kb upstream 10000 false scaffold604: 427433-437432 Linum usitatissimum
Lus10012811.g 10.0kb downstream 10.0kb downstream 12812 true scaffold604: 414621-427432 Linum usitatissimum
Lus10012811.g 10.0kb downstream 10.0kb downstream 10000 false scaffold604: 414621-424620 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454865 5262 Malpighiales View MSA
124251521 5268 Malvidae View MSA
124067904 5270 Rosid View MSA
123739632 5271 Pentapetalae View MSA
122785839 5272 Eudicot View MSA
122043981 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121310221 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain