Gene : Lus10021410.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR10003:SF34 - SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Genomic Order:  24
Name:  ? Lus10021410.g Secondary Identifier:  ? PAC:23179173
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum DETOX1-PWY Linum usitatissimum pathologic  
Lusitatissimum DETOX1-PWY-1 Linum usitatissimum pathologic  
Lusitatissimum PWY-6854 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10021410.g 0.5kb upstream 0.5kb upstream 2758 true scaffold612: 193688-196445 Linum usitatissimum
Lus10021410.g 0.5kb upstream 0.5kb upstream 500 false scaffold612: 195946-196445 Linum usitatissimum
Lus10021410.g 0.5kb downstream 0.5kb downstream 2758 true scaffold612: 193188-195945 Linum usitatissimum
Lus10021410.g 0.5kb downstream 0.5kb downstream 500 false scaffold612: 193188-193687 Linum usitatissimum
Lus10021410.g 1.0kb upstream 1.0kb upstream 3258 true scaffold612: 193688-196945 Linum usitatissimum
Lus10021410.g 1.0kb upstream 1.0kb upstream 1000 false scaffold612: 195946-196945 Linum usitatissimum
Lus10021410.g 1.0kb downstream 1.0kb downstream 3258 true scaffold612: 192688-195945 Linum usitatissimum
Lus10021410.g 1.0kb downstream 1.0kb downstream 1000 false scaffold612: 192688-193687 Linum usitatissimum
Lus10021410.g 2.0kb upstream 2.0kb upstream 4258 true scaffold612: 193688-197945 Linum usitatissimum
Lus10021410.g 2.0kb upstream 2.0kb upstream 2000 false scaffold612: 195946-197945 Linum usitatissimum
Lus10021410.g 2.0kb downstream 2.0kb downstream 4258 true scaffold612: 191688-195945 Linum usitatissimum
Lus10021410.g 2.0kb downstream 2.0kb downstream 2000 false scaffold612: 191688-193687 Linum usitatissimum
Lus10021410.g 5.0kb upstream 5.0kb upstream 7258 true scaffold612: 193688-200945 Linum usitatissimum
Lus10021410.g 5.0kb upstream 5.0kb upstream 5000 false scaffold612: 195946-200945 Linum usitatissimum
Lus10021410.g 5.0kb downstream 5.0kb downstream 7258 true scaffold612: 188688-195945 Linum usitatissimum
Lus10021410.g 5.0kb downstream 5.0kb downstream 5000 false scaffold612: 188688-193687 Linum usitatissimum
Lus10021410.g 10.0kb upstream 10.0kb upstream 12258 true scaffold612: 193688-205945 Linum usitatissimum
Lus10021410.g 10.0kb upstream 10.0kb upstream 10000 false scaffold612: 195946-205945 Linum usitatissimum
Lus10021410.g 10.0kb downstream 10.0kb downstream 12258 true scaffold612: 183688-195945 Linum usitatissimum
Lus10021410.g 10.0kb downstream 10.0kb downstream 10000 false scaffold612: 183688-193687 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459824 5262 Malpighiales View MSA
124253159 5268 Malvidae View MSA
124067425 5270 Rosid View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain